Factsheet for Solyc03g078120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G220900.1	Wheat	cytosol	53.33	34.33
GSMUA_Achr10P...	Banana	nucleus	57.33	33.46
HORVU0Hr1G000630.1	Barley	nucleus	56.67	31.95
Solyc03g098190.2.1	Tomato	nucleus	49.33	29.72
KRH43549	Soybean	cytosol	56.67	26.32
CDX81124	Canola	nucleus	58.67	25.73
HORVU2Hr1G045580.1	Barley	nucleus	56.67	24.29
AT5G64060.1	Thale cress	nucleus	57.33	24.16
HORVU7Hr1G033990.1	Barley	nucleus	56.0	24.0
CDY44793	Canola	nucleus	55.33	23.71
CDY43785	Canola	nucleus	54.0	23.55
Bra024263.1-P	Field mustard	nucleus	54.0	23.55
CDX84485	Canola	nucleus	54.0	23.41
Solyc08g077110.2.1	Tomato	nucleus	50.67	22.35
Solyc06g061080.2.1	Tomato	nucleus	50.0	22.26
KRH59567	Soybean	cytosol, golgi, nucleus	46.67	22.08
TraesCS1D01G266500.1	Wheat	nucleus	57.33	21.77
Bra028640.1-P	Field mustard	nucleus	56.0	21.05
OQU82661	Sorghum	nucleus	55.33	20.49
Zm00001d002945_P010	Maize	cytosol	55.33	20.34
TraesCS6B01G033000.1	Wheat	nucleus	49.33	20.27
TraesCS1A01G266300.2	Wheat	nucleus	57.33	20.05
HORVU1Hr1G065570.2	Barley	nucleus	57.33	19.95
TraesCS1B01G277300.1	Wheat	nucleus	57.33	19.91
CDX69911	Canola	nucleus	57.33	19.63
GSMUA_Achr7P23330_001	Banana	nucleus	53.33	19.61
CDY21575	Canola	nucleus	56.67	19.59
GSMUA_Achr11P...	Banana	nucleus	56.0	19.18
TraesCS6A01G003800.1	Wheat	nucleus	48.0	19.1
TraesCS2B01G616900.1	Wheat	nucleus	51.33	18.97
TraesCSU01G137200.2	Wheat	cytosol, nucleus, plastid	51.33	18.97
TraesCS2D01G567000.1	Wheat	cytosol	51.33	18.97
Bra009379.1-P	Field mustard	nucleus	57.33	18.94
KXG22035	Sorghum	nucleus	56.0	18.92
HORVU2Hr1G127510.1	Barley	nucleus	50.67	18.91
HORVU2Hr1G127550.1	Barley	nucleus	50.67	18.91
Zm00001d010227_P003	Maize	nucleus	56.0	18.88
Os05t0426200-02	Rice	nucleus	56.0	18.71
Solyc05g055480.2.1	Tomato	nucleus	48.0	18.65
Bra006019.1-P	Field mustard	nucleus	44.0	18.18
CDX78356	Canola	nucleus	44.0	18.18
Zm00001d038227_P001	Maize	nucleus	53.33	17.7
AT5G09330.5	Thale cress	nucleus	56.0	17.18
Solyc11g005920.1.1	Tomato	nucleus	78.67	17.18
VIT_04s0044g01220.t01	Wine grape	nucleus	64.0	17.14
KRH64046	Soybean	nucleus	53.33	16.56
Solyc11g008010.1.1	Tomato	endoplasmic reticulum, plasma membrane	49.33	15.91
Solyc06g074170.2.1	Tomato	nucleus	43.33	15.89
KRH53893	Soybean	nucleus	52.0	15.51
Solyc11g068750.1.1	Tomato	nucleus, plasma membrane	43.33	14.38
Solyc02g036430.1.1	Tomato	nucleus	52.67	13.98
Solyc11g008000.1.1	Tomato	nucleus	48.67	13.83
Solyc05g055470.2.1	Tomato	nucleus	49.33	13.6
Solyc06g073050.2.1	Tomato	nucleus	46.67	11.76
Solyc12g056790.1.1	Tomato	nucleus	46.0	11.69
Solyc04g072220.2.1	Tomato	cytosol, nucleus, plastid	45.33	11.35
Solyc03g080090.2.1	Tomato	nucleus	46.0	10.97
Solyc02g081270.2.1	Tomato	nucleus	52.0	7.58

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4BHP2	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF46	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc03g078120.2	EnsemblPlants:Solyc03g078120.2.1	UniParc:UPI0002767DBF

Description

No Description!

Coordinates

chr3:-:50090927..50095668

Molecular Weight (calculated)

17847.7 Da

IEP (calculated)

9.668

GRAVY (calculated)

-0.422

Length

150 amino acids

Sequence
(BLAST)

001: MAKLPPGFRF HPTDVELIMY YLKRKIMVKK ILFEVISELN IYKFSPSDLP DKCCYKSKDL EWYFFCPSER KYASGFKMNR TTDIGFWKIT GRDRRVLYDE
101: KFVGSVKTLV FHQGKAPRVQ RTDWVIHEYR FEDKDTADAG FSLPTLNLIH

Best Arabidopsis Sequence Match ( AT5G09330.1 )
(BLAST)

001: MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLLVDAIAE VDIYKFEPPD LPDMSFIRSG DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM

Arabidopsis Description

NAC082NAC domain-containing protein 82 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY82]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.