Factsheet for HORVU2Hr1G127510.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G127550.1	Barley	nucleus	100.0	100.0
TraesCS2D01G567000.1	Wheat	cytosol	87.06	86.21
TraesCSU01G137200.2	Wheat	cytosol, nucleus, plastid	86.07	85.22
TraesCS2B01G616900.1	Wheat	nucleus	85.32	84.48
Solyc03g078120.2.1	Tomato	cytosol	18.91	50.67
Zm00001d002945_P010	Maize	cytosol	47.76	47.06
OQU82661	Sorghum	nucleus	46.77	46.42
HORVU0Hr1G000630.1	Barley	nucleus	29.35	44.36
KRH43549	Soybean	cytosol	28.61	35.6
HORVU5Hr1G087850.4	Barley	nucleus	21.39	34.96
HORVU7Hr1G033990.1	Barley	nucleus	30.1	34.57
Bra024263.1-P	Field mustard	nucleus	29.35	34.3
CDY43785	Canola	nucleus	29.35	34.3
HORVU2Hr1G045580.1	Barley	nucleus	29.85	34.29
CDX81124	Canola	nucleus	28.86	33.92
CDX84485	Canola	nucleus	28.86	33.53
CDY44793	Canola	nucleus	29.1	33.43
KRH59567	Soybean	cytosol, golgi, nucleus	25.87	32.81
AT5G64060.1	Thale cress	nucleus	28.36	32.02
HORVU1Hr1G065570.2	Barley	nucleus	33.33	31.09
Bra028640.1-P	Field mustard	nucleus	28.86	29.07
Bra006019.1-P	Field mustard	nucleus	25.62	28.37
CDX78356	Canola	nucleus	25.37	28.1
CDY21575	Canola	nucleus	30.1	27.88
CDX69911	Canola	nucleus	30.35	27.85
Bra009379.1-P	Field mustard	nucleus	30.35	26.87
HORVU5Hr1G087840.5	Barley	nucleus, plastid	22.14	26.81
KRH64046	Soybean	nucleus	31.34	26.09
HORVU1Hr1G049840.3	Barley	cytosol	22.64	25.49
KRH53893	Soybean	nucleus	31.84	25.45
AT5G09330.5	Thale cress	nucleus	29.6	24.34
PGSC0003DMT400073779	Potato	nucleus	31.84	23.62
VIT_04s0044g01220.t01	Wine grape	nucleus	32.84	23.57
HORVU3Hr1G036380.1	Barley	cytosol	26.37	21.99
HORVU7Hr1G060310.1	Barley	nucleus	31.34	19.5
Solyc11g005920.1.1	Tomato	nucleus	33.08	19.36
HORVU5Hr1G086730.1	Barley	nucleus	14.18	18.75
HORVU6Hr1G093050.4	Barley	cytosol, golgi, nucleus	28.11	17.63
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	27.61	16.11
HORVU5Hr1G074230.30	Barley	nucleus, plastid	24.88	13.19
HORVU7Hr1G070780.5	Barley	nucleus	22.39	12.78
HORVU5Hr1G086780.2	Barley	cytosol, nucleus	6.22	11.26
HORVU0Hr1G021100.1	Barley	cytosol, plastid	3.98	2.81

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G127510
EnsemblPlants:HORVU2Hr1G127510.1	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0VST0	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF46	SUPFAM:SSF101941	UniParc:UPI000295226F
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:767324812..767326746

Molecular Weight (calculated)

42834.1 Da

IEP (calculated)

5.273

GRAVY (calculated)

-0.417

Length

402 amino acids

Sequence
(BLAST)

001: MDMPPLPPGY RFHPTDVELT LYYLKRKLLG KKLHCNTVAE VDIYKFPPWE LPAKSSMPTG DLQWYFFCTR GRKYSVGYRT NRSTEGGYWK ATGKDRQVVY
101: ENRTVGMKRT LVFHAGKAPK GTRTDWVMYE YRLAQGEIPD AGARLDDSVL CKVHKKSGLG PKIGEQYGVP FEEVEEELND AKGDASCLSP SAPPAAPQSA
201: SGPSRGDVLN SAGEQLVSLS LSPSNNGESA ASGARPDRAS CPDVNWDSIH VHQLADIIGH ISTNPVGQDG PSSDLTTANQ DTEALSDNSE SIFDIAHQVV
301: PSSLGSSLCK QCDKCGVRLV DPLLEPVAGE PYVELNDLLS RCGAAGHVRD GSSSQAVVLS NGEGPPLDLE LKLGLGLESC DSVGHSSGAV SAAASGSGAP
401: SS

Best Arabidopsis Sequence Match ( AT1G34190.1 )
(BLAST)

001: MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD

Arabidopsis Description

NAC017NAC017 [Source:UniProtKB/TrEMBL;Acc:A0A178WNW4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.