Factsheet for HORVU5Hr1G087840.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G356000.1	Wheat	nucleus	76.51	98.07
TraesCS5D01G360700.1	Wheat	nucleus	75.6	96.91
KXG36156	Sorghum	nucleus	65.06	88.16
Zm00001d021424_P001	Maize	nucleus	64.46	87.35
GSMUA_Achr3P13880_001	Banana	cytosol	56.33	77.92
VIT_17s0053g00740.t01	Wine grape	nucleus	55.72	77.73
CDX92153	Canola	nucleus	50.6	74.34
CDX95832	Canola	nucleus	50.6	74.34
PGSC0003DMT400079749	Potato	nucleus	54.22	72.0
Solyc03g098190.2.1	Tomato	nucleus	53.92	71.89
Bra022236.1-P	Field mustard	nucleus	52.41	71.02
AT3G17730.1	Thale cress	nucleus	52.11	70.33
KRH09473	Soybean	nucleus	54.52	68.56
KRH38928	Soybean	nucleus	54.52	68.3
Os09t0552800-00	Rice	nucleus	72.29	65.57
HORVU5Hr1G087850.4	Barley	nucleus	46.39	62.6
HORVU0Hr1G000630.1	Barley	nucleus	28.61	35.71
HORVU1Hr1G049840.3	Barley	cytosol	31.63	29.41
HORVU2Hr1G045580.1	Barley	nucleus	28.31	26.86
HORVU7Hr1G033990.1	Barley	nucleus	28.31	26.86
HORVU1Hr1G065570.2	Barley	nucleus	28.92	22.27
HORVU2Hr1G127550.1	Barley	nucleus	26.81	22.14
HORVU2Hr1G127510.1	Barley	nucleus	26.81	22.14
HORVU3Hr1G036380.1	Barley	cytosol	30.12	20.75
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	42.77	20.61
HORVU7Hr1G060310.1	Barley	nucleus	30.72	15.79
HORVU6Hr1G093050.4	Barley	cytosol, golgi, nucleus	28.61	14.82
HORVU7Hr1G070780.5	Barley	nucleus	30.12	14.2
HORVU5Hr1G074230.30	Barley	nucleus, plastid	26.81	11.74
HORVU5Hr1G086730.1	Barley	nucleus	4.82	5.26
HORVU0Hr1G021100.1	Barley	cytosol, plastid	1.81	1.05
HORVU5Hr1G086780.2	Barley	cytosol, nucleus	0.3	0.45

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A287S5P7	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU5Hr1G087840	EnsemblPlants:HORVU5Hr1G087840.5	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF8	SUPFAM:SSF101941	UniParc:UPI000B46F8B8
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:579731676..579734320

Molecular Weight (calculated)

37238.2 Da

IEP (calculated)

7.652

GRAVY (calculated)

-0.903

Length

332 amino acids

Sequence
(BLAST)

001: KSRGEDDYCA SYPSRRRSTQ NQKKRKPTYK SSWPPGKGSS SRSGEEEAKC ASCSSCRHRK VLNRRRHSVG MAPVGLPPGF RFHPTDEELV NYYLKRKIHG
101: LHIELDIIPE VDLYKCEPWD LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVMT QQHHGGGGSG GGARAIGMKK TLVYYRGRAP
201: QGVRTDWVMH EYRLDDKDSE DTIAIQDTYA LCRVFKKNAI CAEVEELQEG QCSMALLEGA CQQLLAAGSR TTAGQEYYQT PSPDVPAGST SGGADPDAED
301: DDADKDDSWM QFISEDAWCS STVAEESTSC VA

Best Arabidopsis Sequence Match ( AT3G17730.1 )
(BLAST)

001: MAPVGLPPGF RFHPTDEELV NYYLKRKING QEIELDIIPE VDLYKCEPWD LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRGGYWK STGKDRRVTS
101: QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS
201: PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY

Arabidopsis Description

anac057NAC domain containing protein 57 [Source:UniProtKB/TrEMBL;Acc:Q9LSH5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.