CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021424_P001	Maize	nucleus	97.14	97.14
TraesCS5B01G356000.1	Wheat	nucleus	87.35	82.63
TraesCS5D01G360700.1	Wheat	nucleus	86.94	82.24
GSMUA_Achr3P13880_001	Banana	cytosol	75.92	77.5
VIT_17s0053g00740.t01	Wine grape	nucleus	73.88	76.05
CDX92153	Canola	nucleus	66.94	72.57
CDX95832	Canola	nucleus	66.94	72.57
Bra022236.1-P	Field mustard	nucleus	69.39	69.39
EER97157	Sorghum	nucleus	61.63	69.27
PGSC0003DMT400079749	Potato	nucleus	70.2	68.8
Solyc03g098190.2.1	Tomato	nucleus	69.8	68.67
AT3G17730.1	Thale cress	nucleus	68.57	68.29
KRH09473	Soybean	nucleus	71.84	66.67
KRH38928	Soybean	nucleus	71.84	66.42
HORVU5Hr1G087840.5	Barley	nucleus, plastid	88.16	65.06
Os09t0552800-00	Rice	nucleus	91.43	61.2
EER94455	Sorghum	nucleus	45.31	31.44
KXG22035	Sorghum	nucleus	40.41	22.3
OQU82661	Sorghum	nucleus	36.73	22.22
EER95621	Sorghum	nucleus	57.14	20.53
KXG32209	Sorghum	endoplasmic reticulum, nucleus, peroxisome	40.41	19.11
OQU79937	Sorghum	nucleus	41.22	15.21
OQU80699	Sorghum	plastid	41.22	15.07
EES06041	Sorghum	nucleus	39.18	14.72
KXG35937	Sorghum	nucleus	35.1	12.13

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1B6QE08	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	EnsemblPlants:KXG36156	ProteinID:KXG36156	ProteinID:KXG36156.1	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF8	EnsemblPlantsGene:SORBI_3002G290800
SUPFAM:SSF101941	UniParc:UPI00081AD93A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:66915105..66918721

Molecular Weight (calculated)

27658.4 Da

IEP (calculated)

5.035

GRAVY (calculated)

-0.620

Length

245 amino acids

Sequence
(BLAST)

001: MAPVGLPPGF RFHPTDEELV NYYLKRKIHG LKIELDIIPE VDLYKCEPWE LADKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVLH
101: HAGRPIGMKK TLVYYRGRAP QGVRTDWVMH EYRLDDKDAE DTLPIQDTYA LCRVFKKNAI CTEVDGLQAQ CSMALLEGAC QQLLTSASQE YQTPSPDVPV
201: GSTSGGADDD ADKDESWMQF ISDDAWCSST ADGAEESTSC VALAS

Best Arabidopsis Sequence Match ( AT3G17730.1 )
(BLAST)

001: MAPVGLPPGF RFHPTDEELV NYYLKRKING QEIELDIIPE VDLYKCEPWD LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRGGYWK STGKDRRVTS
101: QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS
201: PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY

Arabidopsis Description

anac057NAC domain containing protein 57 [Source:UniProtKB/TrEMBL;Acc:Q9LSH5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.