CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031898_P001	Maize	plastid	92.24	92.52
Zm00001d049913_P001	Maize	plastid	87.76	92.16
Os08t0562200-02	Rice	nucleus	78.96	80.64
HORVU7Hr1G060310.1	Barley	nucleus	75.07	77.86
TraesCS7D01G283800.1	Wheat	nucleus	74.33	77.09
TraesCS7B01G196900.1	Wheat	nucleus	73.88	76.98
TraesCSU01G135000.1	Wheat	nucleus	73.58	69.53
CDY70627	Canola	cytosol	15.97	64.85
CDY41351	Canola	plastid	15.37	61.68
KRH34662	Soybean	cytosol	8.36	61.54
EER97157	Sorghum	nucleus	15.22	46.79
KXG36156	Sorghum	nucleus	15.07	41.22
PGSC0003DMT400079789	Potato	cytosol, nucleus, plastid	29.25	36.1
Solyc11g008000.1.1	Tomato	nucleus	28.06	35.61
Solyc05g055470.2.1	Tomato	nucleus	28.81	35.48
PGSC0003DMT400060090	Potato	nucleus	28.06	35.14
PGSC0003DMT400060087	Potato	nucleus	20.3	34.78
PGSC0003DMT400079791	Potato	nucleus	20.45	34.25
Solyc05g055480.2.1	Tomato	nucleus	19.7	34.2
VIT_13s0019g05240.t01	Wine grape	cytosol, nucleus, plastid	28.36	33.99
AT3G10500.1	Thale cress	cytosol, nucleus, vacuole	27.61	33.7
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	25.22	33.53
OQU82661	Sorghum	nucleus	20.15	33.33
Bra034118.1-P	Field mustard	nucleus	20.75	33.02
CDY41352	Canola	nucleus	20.6	32.78
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	26.27	32.77
CDY61762	Canola	cytosol, nucleus, plastid	25.37	32.76
CDY14157	Canola	cytosol, nucleus, vacuole	25.22	32.75
CDY41354	Canola	cytosol, nucleus, plastid	26.12	32.59
EES06041	Sorghum	nucleus	31.64	32.52
VIT_13s0019g05230.t01	Wine grape	nucleus	20.9	32.41
CDY58437	Canola	cytosol, nucleus, plastid	26.72	32.19
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	26.57	32.13
CDY44853	Canola	cytosol, nucleus, vacuole	26.72	31.96
CDX70227	Canola	cytosol, nucleus, vacuole	26.42	31.95
Bra001366.1-P	Field mustard	nucleus	20.0	31.83
Bra034119.1-P	Field mustard	nucleus	20.9	31.82
CDY41353	Canola	nucleus	20.9	31.75
AT5G04410.1	Thale cress	cytosol, nucleus, plastid	26.87	31.75
CDY11289	Canola	cytosol, nucleus, vacuole	26.72	31.63
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	26.57	31.39
CDY00676	Canola	nucleus	19.85	31.07
AT3G10490.2	Thale cress	nucleus	20.9	31.04
Bra001365.1-P	Field mustard	nucleus	19.85	30.86
KXG22035	Sorghum	nucleus	20.45	30.86
CDX73920	Canola	nucleus	20.3	30.43
CDY00677	Canola	nucleus	20.0	30.11
Solyc11g008010.1.1	Tomato	endoplasmic reticulum, plasma membrane	20.75	29.89
CDY00946	Canola	nucleus	20.0	29.71
Bra029844.1-P	Field mustard	nucleus, plastid	20.15	29.67
KRH34660	Soybean	plastid	20.45	29.46
CDY08601	Canola	nucleus, plastid	20.0	29.45
GSMUA_AchrUn_...	Banana	nucleus	20.9	29.29
KRG92124	Soybean	nucleus	20.15	29.03
GSMUA_Achr9P23580_001	Banana	plastid	25.67	29.01
KRG92121	Soybean	cytosol	26.12	28.97
CDX73921	Canola	cytosol, nucleus, plastid	19.55	28.73
EER94455	Sorghum	nucleus	14.63	27.76
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	24.48	27.33
AT3G10480.3	Thale cress	plastid	21.19	27.0
GSMUA_Achr2P04010_001	Banana	plastid	25.07	26.21
CDY70628	Canola	golgi	15.37	26.01
KXG32209	Sorghum	endoplasmic reticulum, nucleus, peroxisome	18.36	23.75
EER95621	Sorghum	nucleus	19.85	19.5
KXG35937	Sorghum	nucleus	18.21	17.21
OQU79937	Sorghum	nucleus	16.72	16.87

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8057801	UniProt:A0A1Z5RAV3	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	EnsemblPlants:OQU80699	ProteinID:OQU80699	ProteinID:OQU80699.1	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF14	EnsemblPlantsGene:SORBI_3007G166100	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0001A87BBE
RefSeq:XP_002444576.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:60137051..60141707

Molecular Weight (calculated)

72110.9 Da

IEP (calculated)

4.410

GRAVY (calculated)

-0.373

Length

670 amino acids

Sequence
(BLAST)

001: MTHPSSSSSS APPPPPLPPP GAAAGAAEAT SLAPGFRFHP TDEELVSYYL KRKVLGRPLK VDAIAEVDLY KVEPWDLPAR SRLRSRDSQW YFFSRLDRKH
101: ANRARTNRAT SSGYWKTTGK DREVRHGPRV VGMKKTLVFH AGRAPKGERT NWVMHEYRLE GDDAAGIPQD SFVVCRIFQK AGPGPQNGAQ YGAPFVEEEW
201: EEEDADVGLL PVEGDAAVDP EVPRAPVEIP GALERGYLQM SDLIQGLGDQ NGNGTPSLPV SDTSNNSNHS EDVDGNSGDI LSDPNLGSNF LQYEPGEQNS
301: LMLNGSIISN ANAGDFFTNS SPSDGFLELK DFADAANVDF PLGNGSTICP SDGWAWKTPD SAEAVNGANN EIPPVPDDQT FQPDELEQLL QSIQQDSHFG
401: SSIIDPRHSS MTNSVLPEDD SLMFYDAPFD STMCDDGFGQ NGILGSAATN LSGIGMVDDG MQYFDAMDEN LFNDILGSIQ QPAGNSSHAF NGPVLTQEVN
501: NTMYTYSPTQ KVLEPNFVVG APSSARLPEA GSQLNCVVLP DGQAKSSAIG KGFVKILDSI SAPPAFAGEF PANHRKSLAH ISGARPNTLH VSAEVIRIGS
601: LAVPSGADKW ALQKDQGMEL LFSADFEPDT RIHCGCNTIT AVLRGGFCLF FVSAIMLLVS YEVGMCIYGK

Best Arabidopsis Sequence Match ( AT5G04410.1 )
(BLAST)

001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR

Arabidopsis Description

NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.