Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34662 | Soybean | cytosol | 14.24 | 94.51 |
| CDY70627 | Canola | cytosol | 17.05 | 62.42 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 40.23 | 43.47 |
| PGSC0003DMT400060090 | Potato | nucleus | 36.42 | 41.12 |
| Solyc05g055470.2.1 | Tomato | nucleus | 35.76 | 39.71 |
| AT3G10500.1 | Thale cress | cytosol, nucleus, vacuole | 34.6 | 38.07 |
| Solyc11g008000.1.1 | Tomato | nucleus | 33.28 | 38.07 |
| PGSC0003DMT400079789 | Potato | cytosol, nucleus, plastid | 33.11 | 36.83 |
| Bra028790.1-P | Field mustard | cytosol, nucleus, plastid | 30.46 | 36.51 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 34.11 | 36.33 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 33.28 | 36.15 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 33.11 | 36.1 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 30.96 | 36.03 |
| Bra009456.1-P | Field mustard | cytosol, nucleus, plastid | 32.95 | 35.92 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 33.11 | 35.71 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 30.3 | 35.47 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 32.95 | 35.16 |
| Bra005804.1-P | Field mustard | cytosol, nucleus, vacuole | 32.78 | 34.92 |
| KRH09473 | Soybean | nucleus | 15.07 | 34.47 |
| KRH38928 | Soybean | nucleus | 15.07 | 34.34 |
| Bra034120.1-P | Field mustard | cytosol, nucleus, plastid | 30.46 | 34.26 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 30.3 | 34.08 |
| KRH43549 | Soybean | cytosol | 17.55 | 32.82 |
| KRH59567 | Soybean | cytosol, golgi, nucleus | 16.23 | 30.91 |
| KRH13792 | Soybean | nucleus | 17.38 | 30.26 |
| KRH43662 | Soybean | nucleus | 17.05 | 29.6 |
| KRH04320 | Soybean | nucleus | 16.23 | 28.66 |
| KRH58218 | Soybean | nucleus | 16.06 | 28.12 |
| Os02t0822400-01 | Rice | nucleus | 29.14 | 27.85 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 29.47 | 27.68 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 29.47 | 27.55 |
| KRG92124 | Soybean | nucleus | 21.19 | 27.53 |
| TraesCS7D01G283800.1 | Wheat | nucleus | 29.3 | 27.4 |
| KRH34660 | Soybean | plastid | 20.86 | 27.1 |
| EES06041 | Sorghum | nucleus | 28.81 | 26.69 |
| Os08t0562200-02 | Rice | nucleus | 28.81 | 26.52 |
| Zm00001d031898_P001 | Maize | plastid | 29.3 | 26.5 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 28.15 | 26.48 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 28.15 | 26.4 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 27.98 | 26.37 |
| Zm00001d051879_P001 | Maize | nucleus | 28.64 | 26.33 |
| OQU80699 | Sorghum | plastid | 28.97 | 26.12 |
| Zm00001d049913_P001 | Maize | plastid | 27.48 | 26.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.36 | 25.73 |
| TraesCSU01G135000.1 | Wheat | nucleus | 29.3 | 24.96 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 24.01 | 24.17 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 23.51 | 23.95 |
| KRH64046 | Soybean | nucleus | 18.54 | 23.19 |
| KRH22653 | Soybean | nucleus | 14.24 | 23.18 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 23.68 | 22.31 |
| KRH53893 | Soybean | nucleus | 18.54 | 22.27 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 23.34 | 22.0 |
| KRG91745 | Soybean | nucleus | 19.04 | 20.95 |
| KRH35027 | Soybean | nucleus | 19.04 | 20.54 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 21.69 | 20.34 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 21.52 | 20.22 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 21.19 | 19.05 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 21.36 | 19.03 |
| KRH53649 | Soybean | nucleus | 18.21 | 18.39 |
| KRH64275 | Soybean | nucleus | 18.21 | 18.24 |
| KRH72602 | Soybean | nucleus | 17.22 | 17.66 |
| KRH16970 | Soybean | nucleus | 17.05 | 17.46 |
| KRH26664 | Soybean | nucleus | 14.07 | 17.24 |
Protein Annotations
| EntrezGene:100808260 | MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:ACUP02012730 | ncoils:Coil | EnsemblPlantsGene:GLYMA_20G192300 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | UniProt:I1NHS2 |
| InterPro:IPR003441 | InterPro:IPR036093 | EnsemblPlants:KRG92121 | ProteinID:KRG92121 | ProteinID:KRG92121.1 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF43 | SUPFAM:SSF101941 |
| TMHMM:TMhelix | UniParc:UPI000233DB32 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:43093197..43096789
Molecular Weight (calculated)
66942.7 Da
IEP (calculated)
4.588
GRAVY (calculated)
-0.537
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MARMGPGFRF HPTDEELVVF YLKRKMTGNL SRYDHIAVVD VYKLEPWDLP PLSKLKTKDL EWYFFSALDR KYGNGSRTNR ATDRGYWKTT GKDRPVTHGD
101: RTVGMKKTLV YHSGRAPHGR RTNWVMHEYK MLDEELARAG TVPDVFVVCR IFEKSGSGPK NGAKYGAPLD EKEWDVEDEQ EEEEEENEQK DVAPLLVPHN
201: AVAPPPPLSV VADNAEAHPP LTATVDNKYM VAPPPSFQAN FDDEVFNAGA YVETNDLDME LNWNDIIGSD TFPSLNFHHG ECSSHAEYSK VFIKDQEPSA
301: GTFGISRPEN DWPLDMTEQH GVDTNSVNNR DNGELINIGN HLNFNDASND MNLDLFWDAN ENLPTDGSFL EYNDIAIGNG SRSTEADPPA NDILDEYLTL
401: PDDDIYKYIS FDSPQIQESE NFIPNQGSPF TRQNVEGETA DKAVVSNHNS ESQTRNEASS VQNTHEAKFA PGSTNPLVKQ AYGWLAGIPA APAHAMEFPA
501: KEIALGLHPV AQSSHPAHIT TGMISITDIT LRGNAMDWTM GKNGGFSTVI STGFCQPDVN SDALIPVSGK TAFVLSHGWI FLTGFSVLIL SLSCKIGSIM
601: YTGK
101: RTVGMKKTLV YHSGRAPHGR RTNWVMHEYK MLDEELARAG TVPDVFVVCR IFEKSGSGPK NGAKYGAPLD EKEWDVEDEQ EEEEEENEQK DVAPLLVPHN
201: AVAPPPPLSV VADNAEAHPP LTATVDNKYM VAPPPSFQAN FDDEVFNAGA YVETNDLDME LNWNDIIGSD TFPSLNFHHG ECSSHAEYSK VFIKDQEPSA
301: GTFGISRPEN DWPLDMTEQH GVDTNSVNNR DNGELINIGN HLNFNDASND MNLDLFWDAN ENLPTDGSFL EYNDIAIGNG SRSTEADPPA NDILDEYLTL
401: PDDDIYKYIS FDSPQIQESE NFIPNQGSPF TRQNVEGETA DKAVVSNHNS ESQTRNEASS VQNTHEAKFA PGSTNPLVKQ AYGWLAGIPA APAHAMEFPA
501: KEIALGLHPV AQSSHPAHIT TGMISITDIT LRGNAMDWTM GKNGGFSTVI STGFCQPDVN SDALIPVSGK TAFVLSHGWI FLTGFSVLIL SLSCKIGSIM
601: YTGK
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK ICNKPFKFDA ISVTDVYKSE PWDLPDKSRL KSRDLEWYFF SMLDKKYRNG SKTNRATEMG YWKTTGKDRE
101: ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV
201: YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS
301: SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET
401: SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD
501: LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR
101: ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV
201: YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS
301: SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET
401: SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD
501: LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR
Arabidopsis Description
NAC053NAC domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q949N0]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.