Subcellular Localization
min:
: max
Winner_takes_all: golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 97.05 | 97.35 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 88.66 | 89.08 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 87.73 | 88.14 |
| Os02t0822400-01 | Rice | nucleus | 64.13 | 65.35 |
| KRH34662 | Soybean | cytosol | 8.85 | 62.64 |
| EES06041 | Sorghum | nucleus | 62.11 | 61.35 |
| Zm00001d051879_P001 | Maize | nucleus | 59.63 | 58.45 |
| CDY70627 | Canola | cytosol | 14.44 | 56.36 |
| CDY41351 | Canola | plastid | 14.29 | 55.09 |
| TraesCS5A01G353500.1 | Wheat | nucleus | 13.82 | 41.01 |
| TraesCS5A01G220900.1 | Wheat | cytosol | 14.13 | 39.06 |
| PGSC0003DMT400079791 | Potato | nucleus | 22.67 | 36.5 |
| PGSC0003DMT400060090 | Potato | nucleus | 29.19 | 35.14 |
| Solyc05g055480.2.1 | Tomato | nucleus | 20.81 | 34.72 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 30.12 | 34.7 |
| Solyc11g008000.1.1 | Tomato | nucleus | 28.26 | 34.47 |
| PGSC0003DMT400060087 | Potato | nucleus | 20.81 | 34.27 |
| Solyc05g055470.2.1 | Tomato | nucleus | 28.88 | 34.19 |
| PGSC0003DMT400079789 | Potato | cytosol, nucleus, plastid | 28.11 | 33.33 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 28.26 | 32.73 |
| Bra034118.1-P | Field mustard | nucleus | 21.12 | 32.3 |
| CDY41352 | Canola | nucleus | 20.96 | 32.07 |
| AT3G10500.1 | Thale cress | cytosol, nucleus, vacuole | 27.33 | 32.06 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 28.11 | 31.92 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 27.95 | 31.8 |
| CDY00676 | Canola | nucleus | 21.12 | 31.78 |
| Bra009456.1-P | Field mustard | cytosol, nucleus, plastid | 27.33 | 31.77 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 27.33 | 31.77 |
| Bra005804.1-P | Field mustard | cytosol, nucleus, vacuole | 27.95 | 31.75 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 27.33 | 31.43 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 25.16 | 31.4 |
| Bra028790.1-P | Field mustard | cytosol, nucleus, plastid | 24.53 | 31.35 |
| Bra001365.1-P | Field mustard | nucleus | 20.96 | 31.32 |
| Bra034120.1-P | Field mustard | cytosol, nucleus, plastid | 26.09 | 31.28 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 25.0 | 31.02 |
| CDY41353 | Canola | nucleus | 21.12 | 30.84 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 25.62 | 30.73 |
| Bra034119.1-P | Field mustard | nucleus | 20.96 | 30.68 |
| Solyc11g008010.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 22.05 | 30.54 |
| Bra001366.1-P | Field mustard | nucleus | 19.88 | 30.4 |
| VIT_13s0019g05230.t01 | Wine grape | nucleus | 20.34 | 30.32 |
| AT3G10490.2 | Thale cress | nucleus | 20.96 | 29.93 |
| TraesCS6A01G003800.1 | Wheat | nucleus | 17.24 | 29.44 |
| CDY00946 | Canola | nucleus | 20.5 | 29.27 |
| Bra029844.1-P | Field mustard | nucleus, plastid | 20.65 | 29.23 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 26.86 | 29.17 |
| CDY08601 | Canola | nucleus, plastid | 20.5 | 29.01 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 20.5 | 28.95 |
| TraesCS1A01G266300.2 | Wheat | nucleus | 19.1 | 28.67 |
| CDY00677 | Canola | nucleus | 19.72 | 28.54 |
| CDX73920 | Canola | nucleus | 19.72 | 28.41 |
| KRH34660 | Soybean | plastid | 20.5 | 28.39 |
| KRG92121 | Soybean | cytosol | 26.4 | 28.15 |
| KRG92124 | Soybean | nucleus | 20.19 | 27.96 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 25.93 | 27.83 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 27.17 | 27.3 |
| CDY70628 | Canola | golgi | 16.61 | 27.02 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 13.82 | 26.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.41 | 26.15 |
| TraesCS2A01G561800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 14.29 | 25.92 |
| AT3G10480.3 | Thale cress | plastid | 20.65 | 25.29 |
| TraesCS2A01G561700.1 | Wheat | nucleus | 16.15 | 24.53 |
| TraesCS3A01G176500.1 | Wheat | cytosol | 17.08 | 22.0 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 19.88 | 18.44 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 18.63 | 16.44 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 16.46 | 15.12 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF49 | SUPFAM:SSF101941 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G406700 | EnsemblPlants:TraesCS6A01G406700.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:611857438..611861339
Molecular Weight (calculated)
70673.6 Da
IEP (calculated)
4.268
GRAVY (calculated)
-0.570
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSPPAAA EEVPMAPGFR FHPTDEELVS YYLRRRVLGR RLRIDAIAEV DLYRLEPWDL PPLSRIRSRD AQWYFFARLD RKVAGAGAGG RGGPGNRTNR
101: ATPRGYWKTT GKDREVFHRG RAVGMKKTLV FHAGRAPKGD RTNWVMHEYR LLDNDGPQDM HVVCRIFQKV GSGPQNGAQY GAPYMEEEWE NEDDAIENTP
201: TSGTSTEMLA ITDTASAESN VEDEHIFSGI NERVQTPEVL IPQEIAPLQA IAPPQAQDFN GTGMVSYADG DVPLDEILQE PVSDVSADNT GEPEEQSPLD
301: DHFSLADLSG CPNQDDGYVC QAGPIMFSDP SNGDQAYYPM RTYGNRNHAY RALSAEEFSD TGNGTNAYSG QQQACPSDDQ NLYSGLQQAC PSDEQNLYLP
401: TNGLPFPQQM DDNAPFYEAS SDHKWENGKD DYVNVDDISL FEDDDIMALL NASDNDFSLD LLGPVDGSNS QLPAASNFDQ KDEAKAQYGA SSSGSRENLY
501: PDTMVPDVPM DDNAGKRYFT NMLGSYPAPP AMASEFPPTT GKSIAALSRP SQIRVTAGIV QLGDHSFTGN EGSWPLQKNG VFNLLLSFTV ESNVSTKSIT
601: FDDEPAATRV STVPTVLRGG LYLFFVSAMI LMLSFKVGSC IYSR
101: ATPRGYWKTT GKDREVFHRG RAVGMKKTLV FHAGRAPKGD RTNWVMHEYR LLDNDGPQDM HVVCRIFQKV GSGPQNGAQY GAPYMEEEWE NEDDAIENTP
201: TSGTSTEMLA ITDTASAESN VEDEHIFSGI NERVQTPEVL IPQEIAPLQA IAPPQAQDFN GTGMVSYADG DVPLDEILQE PVSDVSADNT GEPEEQSPLD
301: DHFSLADLSG CPNQDDGYVC QAGPIMFSDP SNGDQAYYPM RTYGNRNHAY RALSAEEFSD TGNGTNAYSG QQQACPSDDQ NLYSGLQQAC PSDEQNLYLP
401: TNGLPFPQQM DDNAPFYEAS SDHKWENGKD DYVNVDDISL FEDDDIMALL NASDNDFSLD LLGPVDGSNS QLPAASNFDQ KDEAKAQYGA SSSGSRENLY
501: PDTMVPDVPM DDNAGKRYFT NMLGSYPAPP AMASEFPPTT GKSIAALSRP SQIRVTAGIV QLGDHSFTGN EGSWPLQKNG VFNLLLSFTV ESNVSTKSIT
601: FDDEPAATRV STVPTVLRGG LYLFFVSAMI LMLSFKVGSC IYSR
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
Arabidopsis Description
NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.