Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G000630.1 | Barley | nucleus | 85.41 | 74.81 |
| HORVU2Hr1G045580.1 | Barley | nucleus | 87.12 | 58.0 |
| HORVU7Hr1G033990.1 | Barley | nucleus | 86.7 | 57.71 |
| Solyc03g078120.2.1 | Tomato | cytosol | 34.33 | 53.33 |
| TraesCS1A01G266300.2 | Wheat | nucleus | 88.84 | 48.25 |
| TraesCS1B01G277300.1 | Wheat | nucleus | 88.41 | 47.69 |
| GSMUA_Achr10P... | Banana | nucleus | 52.36 | 47.47 |
| HORVU1Hr1G065570.2 | Barley | nucleus | 87.12 | 47.1 |
| TraesCS1D01G266500.1 | Wheat | nucleus | 76.39 | 45.06 |
| Os05t0426200-02 | Rice | nucleus | 71.24 | 36.97 |
| TraesCS5A01G353500.1 | Wheat | nucleus | 33.91 | 36.41 |
| KXG22035 | Sorghum | nucleus | 67.81 | 35.59 |
| Zm00001d038227_P001 | Maize | nucleus | 68.24 | 35.18 |
| Zm00001d010227_P003 | Maize | nucleus | 65.24 | 34.16 |
| KRH43549 | Soybean | cytosol | 41.2 | 29.72 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 51.07 | 29.17 |
| CDY43785 | Canola | nucleus | 42.92 | 29.07 |
| Bra024263.1-P | Field mustard | nucleus | 42.92 | 29.07 |
| CDX84485 | Canola | nucleus | 42.92 | 28.9 |
| AT5G64060.1 | Thale cress | nucleus | 43.35 | 28.37 |
| CDX81124 | Canola | nucleus | 41.63 | 28.36 |
| CDY44793 | Canola | nucleus | 42.49 | 28.29 |
| GSMUA_Achr11P... | Banana | nucleus | 52.79 | 28.08 |
| KRH59567 | Soybean | cytosol, golgi, nucleus | 35.62 | 26.18 |
| TraesCS6A01G003800.1 | Wheat | nucleus | 41.63 | 25.73 |
| Bra028640.1-P | Field mustard | nucleus | 41.2 | 24.06 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 33.91 | 23.58 |
| CDX69911 | Canola | nucleus | 42.49 | 22.6 |
| CDY21575 | Canola | nucleus | 42.06 | 22.58 |
| Bra006019.1-P | Field mustard | nucleus | 34.76 | 22.31 |
| CDX78356 | Canola | nucleus | 34.76 | 22.31 |
| Bra009379.1-P | Field mustard | nucleus | 42.49 | 21.81 |
| KRH64046 | Soybean | nucleus | 42.92 | 20.7 |
| AT5G09330.5 | Thale cress | nucleus | 42.49 | 20.25 |
| PGSC0003DMT400073779 | Potato | nucleus | 45.49 | 19.56 |
| KRH53893 | Soybean | nucleus | 42.06 | 19.48 |
| VIT_04s0044g01220.t01 | Wine grape | nucleus | 45.92 | 19.11 |
| TraesCS2A01G561800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 28.33 | 18.59 |
| TraesCS2A01G561700.1 | Wheat | nucleus | 30.9 | 16.98 |
| TraesCS3A01G176500.1 | Wheat | cytosol | 34.33 | 16.0 |
| Solyc11g005920.1.1 | Tomato | nucleus | 45.92 | 15.57 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 39.06 | 14.13 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 39.06 | 13.11 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 33.91 | 11.27 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 34.76 | 11.1 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G220900.1 | EnsemblPlantsGene:TraesCS5A01G220900 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF61 | PFAM:PF02365 | PFscan:PS51005 | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr5A:+:437211508..437212587
Molecular Weight (calculated)
26441.2 Da
IEP (calculated)
6.035
GRAVY (calculated)
-0.438
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQTCLPPGF RFHPTDVEFV SYYLKRKIMG KKLFVEAISE VELYKFAPWD LLINHKSCLQ SKDLEWFFFC PHDKKNPKGS WTNRTTPNGY WKTSGKDGTI
101: DLNSRIVGLK KTLIFHEGKA PKGNRTDWVM YEYKMEDETL VSTGFSKDAY VLSGLGPRIG EQYRAPFDGN EWENLDVGTY ILSFAPSSGV EDSQVESSAW
201: VTAIVIREPS APQQSVQFSE HVNICSDEVA GLT
101: DLNSRIVGLK KTLIFHEGKA PKGNRTDWVM YEYKMEDETL VSTGFSKDAY VLSGLGPRIG EQYRAPFDGN EWENLDVGTY ILSFAPSSGV EDSQVESSAW
201: VTAIVIREPS APQQSVQFSE HVNICSDEVA GLT
001: MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLLVDAIAE VDIYKFEPPD LPDMSFIRSG DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM
Arabidopsis Description
NAC082NAC domain-containing protein 82 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY82]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.