Factsheet for GSMUA_Achr7P23330_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	45.83	72.76
GSMUA_Achr11P...	Banana	nucleus	63.24	58.9
HORVU0Hr1G000630.1	Barley	nucleus	36.03	55.26
Solyc03g078120.2.1	Tomato	cytosol	19.61	53.33
TraesCS5A01G220900.1	Wheat	cytosol	29.17	51.07
HORVU2Hr1G045580.1	Barley	nucleus	38.48	44.86
HORVU7Hr1G033990.1	Barley	nucleus	38.24	44.57
TraesCS1D01G266500.1	Wheat	nucleus	41.42	42.78
KXG22035	Sorghum	nucleus	45.34	41.67
Zm00001d010227_P003	Maize	nucleus	44.85	41.12
HORVU1Hr1G065570.2	Barley	nucleus	43.38	41.07
GSMUA_Achr3P13880_001	Banana	cytosol	24.02	40.83
GSMUA_Achr6P03200_001	Banana	cytosol	21.08	40.38
TraesCS1A01G266300.2	Wheat	nucleus	42.4	40.33
TraesCS1B01G277300.1	Wheat	nucleus	42.4	40.05
KRH43549	Soybean	cytosol	31.62	39.94
GSMUA_Achr9P23940_001	Banana	cytosol	23.28	39.42
Zm00001d038227_P001	Maize	nucleus	43.63	39.38
Os05t0426200-02	Rice	nucleus	42.4	38.53
CDY43785	Canola	nucleus	32.35	38.37
Bra024263.1-P	Field mustard	nucleus	32.35	38.37
CDX84485	Canola	nucleus	32.35	38.15
GSMUA_Achr11P...	Banana	cytosol	17.4	37.57
GSMUA_Achr3P18070_001	Banana	nucleus	22.55	37.1
KRH59567	Soybean	cytosol, golgi, nucleus	28.68	36.91
CDX81124	Canola	nucleus	30.88	36.84
AT5G64060.1	Thale cress	nucleus	31.86	36.52
CDY44793	Canola	nucleus	30.64	35.71
Bra028640.1-P	Field mustard	nucleus	30.39	31.08
CDX78356	Canola	nucleus	27.21	30.58
Bra006019.1-P	Field mustard	nucleus	27.21	30.58
GSMUA_AchrUn_...	Banana	nucleus	26.47	30.42
GSMUA_Achr1P02820_001	Banana	nucleus	27.45	30.11
CDY21575	Canola	nucleus	31.37	29.49
CDX69911	Canola	nucleus	31.62	29.45
KRH64046	Soybean	nucleus	33.82	28.57
Bra009379.1-P	Field mustard	nucleus	31.62	28.41
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	19.61	27.59
GSMUA_Achr5P03360_001	Banana	nucleus	24.02	27.37
AT5G09330.5	Thale cress	nucleus	32.6	27.2
GSMUA_Achr11P...	Banana	nucleus	25.25	26.89
KRH53893	Soybean	nucleus	32.6	26.44
PGSC0003DMT400073779	Potato	nucleus	33.33	25.09
GSMUA_Achr5P18140_001	Banana	nucleus	22.55	24.6
VIT_04s0044g01220.t01	Wine grape	nucleus	33.33	24.29
GSMUA_Achr11P...	Banana	nucleus	22.55	23.23
GSMUA_AchrUn_...	Banana	nucleus	28.68	20.56
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	27.94	20.5
Solyc11g005920.1.1	Tomato	nucleus	34.31	20.38
GSMUA_Achr8P24280_001	Banana	nucleus	28.92	20.1
GSMUA_AchrUn_...	Banana	nucleus	23.53	20.08
GSMUA_Achr9P23580_001	Banana	plastid	28.68	19.73
GSMUA_Achr8P13430_001	Banana	nucleus	28.68	19.28
GSMUA_Achr5P23620_001	Banana	nucleus	24.26	18.57
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	25.98	17.67
GSMUA_Achr2P04010_001	Banana	plastid	25.98	16.54
GSMUA_Achr1P03560_001	Banana	nucleus	22.3	15.85
GSMUA_Achr4P29170_001	Banana	nucleus	22.3	15.83
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	22.55	12.12

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G23330_001
EnsemblPlants:GSMUA_Achr7P23330_001	EnsemblPlants:GSMUA_Achr7T23330_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TK19	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF46	SUPFAM:SSF101941
UniParc:UPI0002963713	:	:	:	:	:

Description

no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G23330_001]

Coordinates

chr7:-:25584911..25587898

Molecular Weight (calculated)

45731.5 Da

IEP (calculated)

4.352

GRAVY (calculated)

-0.490

Length

408 amino acids

Sequence
(BLAST)

001: MAKTNLPPGF RFHPTDVELV WYYLKRKVMG KPFRSEAISE VELYKFAPWE LPEKSRLRTR DLEWYFFCHR DKKYSNGSRS NRATDGGYWK ATGKDKSVIH
101: NSCTVGMRRT LVFHEGKPPK GTRTNWVMYE YRLQSRELVD AGFAQDAYLL CKVFQKSGLG PRIGEQYGAP FNEEDWEDDT AIESSFPLPC VSSCLSAEPL
201: DNQAIQADPV SKQPIASSAV ELLSDHDLLD VDGISLEELA EFLNSSPLVE NADGKMPDLT IPSMNVNEAA AMDPEGVYNE LDDLSTGELI SGNIDLIENI
301: LNETALCPTL QELDSKQYVE LNDLIGDGNP YVSVEPSTPF APNPSGHWPD LENLNHILDP IPYFDNDVYG GMHGLPHTGP DTTSQHWLPG MQIGDFGEFV
401: PPLERSSF

Best Arabidopsis Sequence Match ( AT5G04410.1 )
(BLAST)

001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR

Arabidopsis Description

NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.