Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0053g00740.t01 | Wine grape | nucleus | 82.08 | 82.77 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 78.75 | 78.42 |
| KXG36156 | Sorghum | nucleus | 77.5 | 75.92 |
| CDX92153 | Canola | nucleus | 70.42 | 74.78 |
| CDX95832 | Canola | nucleus | 70.42 | 74.78 |
| Zm00001d021424_P001 | Maize | nucleus | 76.25 | 74.69 |
| PGSC0003DMT400079749 | Potato | nucleus | 77.5 | 74.4 |
| Solyc03g098190.2.1 | Tomato | nucleus | 77.08 | 74.3 |
| KRH09473 | Soybean | nucleus | 80.0 | 72.73 |
| AT3G17730.1 | Thale cress | nucleus | 74.17 | 72.36 |
| Bra022236.1-P | Field mustard | nucleus | 73.75 | 72.24 |
| KRH38928 | Soybean | nucleus | 79.58 | 72.08 |
| TraesCS5D01G360700.1 | Wheat | nucleus | 76.67 | 71.04 |
| TraesCS5B01G356000.1 | Wheat | nucleus | 76.67 | 71.04 |
| HORVU5Hr1G087840.5 | Barley | nucleus, plastid | 77.92 | 56.33 |
| Os09t0552800-00 | Rice | nucleus | 79.58 | 52.19 |
| GSMUA_Achr11P... | Banana | cytosol | 37.08 | 47.09 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 39.58 | 44.6 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 41.25 | 39.92 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 60.83 | 39.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.67 | 38.31 |
| GSMUA_Achr10P... | Banana | nucleus | 40.42 | 37.74 |
| GSMUA_Achr11P... | Banana | nucleus | 55.0 | 34.46 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 38.33 | 31.72 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 45.42 | 30.45 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 43.33 | 27.81 |
| GSMUA_Achr11P... | Banana | nucleus | 42.08 | 25.51 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 40.83 | 24.02 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 54.17 | 23.38 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 57.08 | 22.57 |
| GSMUA_Achr11P... | Banana | nucleus | 39.58 | 21.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.25 | 19.51 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 40.83 | 18.39 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 44.17 | 18.06 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 42.5 | 17.74 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 41.25 | 17.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.92 | 16.53 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 38.33 | 15.51 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 37.08 | 13.88 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 34.58 | 13.83 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 42.5 | 13.44 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G13880_001 |
| EnsemblPlants:GSMUA_Achr3P13880_001 | EnsemblPlants:GSMUA_Achr3T13880_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0SEF5 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF8 | SUPFAM:SSF101941 |
| UniParc:UPI000296759D | : | : | : | : | : |
Description
no apical meristem protein, putative [Source:GMGC_GENE;Acc:GSMUA_Achr3G13880_001]
Coordinates
chr3:+:13005500..13006815
Molecular Weight (calculated)
27474.3 Da
IEP (calculated)
4.698
GRAVY (calculated)
-0.602
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVGLPPGF RFHPTDEELV NYYLKRKIHG LKIELDIIPE VDLYKCEPWE LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVCS
101: QNRAIGMKKT LVYYRGRAPQ GIRTDWVMHE YRLDDKECED TMGFQDSYAL CRVFKKNVIC TEVEEQAQCS IILGESSQGV VVAAEYETTS PDMPVGSSSC
201: VEEEDKDDAW MQFITDDAWC STLPSNEGGE EASCVAIVNS
101: QNRAIGMKKT LVYYRGRAPQ GIRTDWVMHE YRLDDKECED TMGFQDSYAL CRVFKKNVIC TEVEEQAQCS IILGESSQGV VVAAEYETTS PDMPVGSSSC
201: VEEEDKDDAW MQFITDDAWC STLPSNEGGE EASCVAIVNS
001: MAPVGLPPGF RFHPTDEELV NYYLKRKING QEIELDIIPE VDLYKCEPWD LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRGGYWK STGKDRRVTS
101: QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS
201: PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY
101: QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS
201: PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY
Arabidopsis Description
anac057NAC domain containing protein 57 [Source:UniProtKB/TrEMBL;Acc:Q9LSH5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.