Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P13880_001 | Banana | cytosol | 82.77 | 82.08 |
| CDX92153 | Canola | nucleus | 76.05 | 80.09 |
| CDX95832 | Canola | nucleus | 76.05 | 80.09 |
| PGSC0003DMT400079749 | Potato | nucleus | 84.03 | 80.0 |
| Solyc03g098190.2.1 | Tomato | nucleus | 83.61 | 79.92 |
| AT3G17730.1 | Thale cress | nucleus | 81.51 | 78.86 |
| Bra022236.1-P | Field mustard | nucleus | 80.67 | 78.37 |
| KRH09473 | Soybean | nucleus | 86.55 | 78.03 |
| KRH38928 | Soybean | nucleus | 86.55 | 77.74 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 76.05 | 75.1 |
| TraesCS5D01G360800.1 | Wheat | nucleus | 67.65 | 74.19 |
| TraesCS5B01G356100.1 | Wheat | nucleus | 67.65 | 74.19 |
| TraesCS5A01G353500.1 | Wheat | nucleus | 67.65 | 74.19 |
| KXG36156 | Sorghum | nucleus | 76.05 | 73.88 |
| Zm00001d021424_P001 | Maize | nucleus | 75.63 | 73.47 |
| EER97157 | Sorghum | nucleus | 65.97 | 72.02 |
| Zm00001d021423_P001 | Maize | nucleus | 65.55 | 71.56 |
| TraesCS5D01G360700.1 | Wheat | nucleus | 77.73 | 71.43 |
| TraesCS5B01G356000.1 | Wheat | nucleus | 77.31 | 71.04 |
| HORVU5Hr1G087850.4 | Barley | nucleus | 67.23 | 65.04 |
| HORVU5Hr1G087840.5 | Barley | nucleus, plastid | 77.73 | 55.72 |
| Os09t0552800-00 | Rice | nucleus | 78.57 | 51.09 |
| VIT_19s0085g00950.t01 | Wine grape | nucleus | 56.3 | 47.69 |
| VIT_15s0048g02310.t01 | Wine grape | cytosol | 31.93 | 46.06 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 50.42 | 32.88 |
| VIT_15s0048g02290.t01 | Wine grape | nucleus | 35.71 | 26.48 |
| VIT_13s0019g05230.t01 | Wine grape | nucleus | 43.7 | 24.07 |
| VIT_06s0080g00970.t01 | Wine grape | nucleus | 36.97 | 22.68 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 61.76 | 22.01 |
| VIT_15s0048g02320.t01 | Wine grape | nucleus | 31.93 | 21.53 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 43.7 | 18.6 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 42.86 | 17.83 |
| VIT_15s0048g02300.t01 | Wine grape | nucleus | 31.51 | 17.08 |
| VIT_15s0048g02280.t01 | Wine grape | golgi, nucleus, plasma membrane | 36.55 | 17.03 |
| VIT_04s0044g01220.t01 | Wine grape | nucleus | 37.82 | 16.07 |
| VIT_02s0025g03020.t01 | Wine grape | nucleus | 39.92 | 15.03 |
| VIT_16s0098g00760.t01 | Wine grape | mitochondrion | 39.92 | 14.75 |
| VIT_15s0048g02270.t01 | Wine grape | nucleus | 38.24 | 14.49 |
Protein Annotations
| EntrezGene:100266514 | wikigene:100266514 | MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:CBI35300 | ProteinID:CBI35300.3 |
| UniProt:D7TXS5 | EMBL:FN596258 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | EntrezGene:LOC100266514 | wikigene:LOC100266514 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF8 | SUPFAM:SSF101941 | UniParc:UPI00015CCA8F | ArrayExpress:VIT_17s0053g00740 |
| EnsemblPlantsGene:VIT_17s0053g00740 | EnsemblPlants:VIT_17s0053g00740.t01 | RefSeq:XP_002270576 | RefSeq:XP_002270576.2 | RefSeq:XP_010663931.1 | SEG:seg |
Description
No Description!
Coordinates
chr17:+:16114324..16117507
Molecular Weight (calculated)
27341.9 Da
IEP (calculated)
4.622
GRAVY (calculated)
-0.764
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVGLPPGF RFHPTDEELV NYYLKRKIHG QEIELDIIPE VDLYKCEPWE LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVTC
101: QSRAIGMKKT LVYYRGRAPQ GIRTDWVMHE YRLDDKECEE TSGIQDSYAL CRVFKKNGIC SESEEQGQCS SSLIESSQGV LNDYETMSPD VPLPSSSCME
201: EEDKDDSWMQ FITDDAWCSS NTIMGGADEV SCPPAFTN
101: QSRAIGMKKT LVYYRGRAPQ GIRTDWVMHE YRLDDKECEE TSGIQDSYAL CRVFKKNGIC SESEEQGQCS SSLIESSQGV LNDYETMSPD VPLPSSSCME
201: EEDKDDSWMQ FITDDAWCSS NTIMGGADEV SCPPAFTN
001: MAPVGLPPGF RFHPTDEELV NYYLKRKING QEIELDIIPE VDLYKCEPWD LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRGGYWK STGKDRRVTS
101: QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS
201: PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY
101: QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS
201: PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY
Arabidopsis Description
anac057NAC domain containing protein 57 [Source:UniProtKB/TrEMBL;Acc:Q9LSH5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.