Factsheet for TraesCS5D01G360800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G353500.1	Wheat	nucleus	99.54	99.54
TraesCS5B01G356100.1	Wheat	nucleus	99.08	99.08
HORVU5Hr1G087850.4	Barley	nucleus	98.62	86.99
EER97157	Sorghum	nucleus	85.25	84.86
Zm00001d021423_P001	Maize	nucleus	82.95	82.57
VIT_17s0053g00740.t01	Wine grape	nucleus	74.19	67.65
CDX92153	Canola	nucleus	68.2	65.49
CDX95832	Canola	nucleus	68.2	65.49
Solyc03g098190.2.1	Tomato	nucleus	71.89	62.65
PGSC0003DMT400079749	Potato	nucleus	71.89	62.4
GSMUA_Achr9P23940_001	Banana	cytosol	69.12	62.24
AT3G17730.1	Thale cress	nucleus	70.05	61.79
Bra022236.1-P	Field mustard	nucleus	68.66	60.82
KRH09473	Soybean	nucleus	71.89	59.09
TraesCS5D01G360700.1	Wheat	nucleus	70.51	59.07
KRH38928	Soybean	nucleus	71.43	58.49
TraesCS1D01G194200.2	Wheat	cytosol, nucleus, plastid	47.47	28.07
TraesCS1D01G266500.1	Wheat	nucleus	41.01	22.53
TraesCS2D01G568000.1	Wheat	nucleus	42.4	21.15
TraesCS2D01G567000.1	Wheat	cytosol	39.17	20.94
TraesCS3D01G183900.2	Wheat	cytosol	44.24	19.2
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	60.83	18.91
TraesCS7D01G283800.1	Wheat	nucleus	45.62	15.33
TraesCS6D01G390200.1	Wheat	cytosol, nucleus, peroxisome	41.01	13.86
TraesCS7D01G295100.1	Wheat	nucleus	43.78	13.67
TraesCS5D01G279100.2	Wheat	nucleus, peroxisome, plastid	38.25	12.15

Protein Annotations

EnsemblPlants:TraesCS5D01G360800.1	EnsemblPlantsGene:TraesCS5D01G360800	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PANTHER:PTHR31989
PANTHER:PTHR31989:SF50	PFAM:PF02365	PFscan:PS51005	SUPFAM:SSF101941	MapMan:15.5.17	:

Description

No Description!

Coordinates

chr5D:+:440369969..440372828

Molecular Weight (calculated)

25196.4 Da

IEP (calculated)

6.759

GRAVY (calculated)

-0.927

Length

217 amino acids

Sequence
(BLAST)

001: MAPVGLPPGF RFHPTDEELV NYYLKRKVHG QSIELDIIPE VDLYKCEPWE LAEKSFLPSR DPEWYFFGPR DRKYPNGCRT NRATRAGYWK STGKDRSINY
101: QKRSIGMKKT LVFYQGRAPQ GIRSNWVMHE YRIEESECNN TMGVQDSYAL CRVFKKNVPA GEFEKQGECS SSQAKANQEQ VTDFEDAGES STANENDKDN
201: SWMQFIVEDL WCSNKTK

Best Arabidopsis Sequence Match ( AT3G17730.1 )
(BLAST)

001: MAPVGLPPGF RFHPTDEELV NYYLKRKING QEIELDIIPE VDLYKCEPWD LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRGGYWK STGKDRRVTS
101: QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS
201: PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY

Arabidopsis Description

anac057NAC domain containing protein 57 [Source:UniProtKB/TrEMBL;Acc:Q9LSH5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.