Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 97.42 | 97.98 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 96.7 | 97.68 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 93.7 | 94.92 |
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 13.32 | 80.17 |
| Os03t0119966-01 | Rice | nucleus | 73.5 | 78.92 |
| EER95621 | Sorghum | nucleus | 74.07 | 75.81 |
| Zm00001d048493_P004 | Maize | nucleus | 71.78 | 72.93 |
| Zm00001d027395_P009 | Maize | nucleus | 66.33 | 69.73 |
| TraesCS5D01G360800.1 | Wheat | nucleus | 18.91 | 60.83 |
| GSMUA_Achr11P... | Banana | nucleus | 33.09 | 60.31 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 30.37 | 56.99 |
| TraesCS5D01G360700.1 | Wheat | nucleus | 20.2 | 54.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.51 | 54.08 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 44.13 | 50.74 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 39.97 | 50.18 |
| PGSC0003DMT400055322 | Potato | nucleus | 36.53 | 45.37 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 42.84 | 44.76 |
| Solyc02g036430.1.1 | Tomato | nucleus | 35.82 | 44.25 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 40.69 | 44.1 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 40.11 | 43.55 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 40.54 | 42.11 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 40.69 | 41.89 |
| Bra039745.1-P | Field mustard | nucleus | 31.95 | 40.84 |
| AT5G17260.1 | Thale cress | nucleus | 27.51 | 40.34 |
| AT1G65910.1 | Thale cress | nucleus | 35.53 | 39.3 |
| CDY16943 | Canola | nucleus | 27.94 | 39.24 |
| CDY60870 | Canola | nucleus | 32.23 | 38.99 |
| Bra006392.1-P | Field mustard | cytosol | 27.36 | 38.98 |
| CDX78734 | Canola | cytosol | 27.36 | 38.98 |
| CDX70745 | Canola | cytosol | 27.36 | 38.66 |
| Bra021366.1-P | Field mustard | nucleus | 26.5 | 38.54 |
| CDY49932 | Canola | nucleus | 26.22 | 38.2 |
| AT3G03200.1 | Thale cress | nucleus | 26.07 | 38.0 |
| CDY43143 | Canola | nucleus | 25.93 | 37.87 |
| Bra032009.1-P | Field mustard | nucleus | 25.79 | 37.66 |
| CDY28745 | Canola | cytosol | 25.79 | 37.66 |
| CDY16427 | Canola | nucleus | 31.95 | 37.48 |
| Bra008567.1-P | Field mustard | nucleus | 22.49 | 35.12 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 18.34 | 34.88 |
| CDY21216 | Canola | nucleus | 19.77 | 32.09 |
| TraesCS1D01G266500.1 | Wheat | nucleus | 16.91 | 29.87 |
| TraesCS2D01G567000.1 | Wheat | cytosol | 15.9 | 27.34 |
| TraesCS2D01G568000.1 | Wheat | nucleus | 15.62 | 25.06 |
| TraesCS3D01G183900.2 | Wheat | cytosol | 17.77 | 24.8 |
| Solyc02g081270.2.1 | Tomato | nucleus | 36.25 | 24.59 |
| TraesCS7D01G283800.1 | Wheat | nucleus | 19.2 | 20.74 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 18.62 | 20.25 |
| TraesCS7D01G295100.1 | Wheat | nucleus | 18.77 | 18.85 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 15.76 | 16.11 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS4D01G345300 | EnsemblPlants:TraesCS4D01G345300.1 | SEG:seg |
Description
No Description!
Coordinates
chr4D:-:500021605..500025560
Molecular Weight (calculated)
76986.6 Da
IEP (calculated)
6.128
GRAVY (calculated)
-0.546
Length
698 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS
101: QKRAVGMKKT LVYYRGRAPH GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEQPQWT PSSVERSPTP CDGRGGGDDF
201: ESSSFSFPTE APMTSGSMHG GGFGMQMMGG MPQEDGRWMQ FLSEDAFNAT NPYFMNPAAA SNFSCLPSKV DVALECARLQ HRLALPPLEV EDFPHDVSLD
301: TKTGILQSNP NEVDILQEFL SVASASQELI NGSGSSSYPD MWLGAGTSSG GGHYMNELSS LVDLGAAKAK EEVDNFYHMC GIGASMMRRD DEPGRLVEIS
401: DMQEFKEEKK RPVENLRGVK LVNNDLGEIV VEGDESNPAE GITHYPIQDT SENSGEAGHH MTDHTTDEGG IDTAPIFSQS QPDDFALAIG FDNDGDDNTD
501: PNASFDLYGK VDVQRGLFVS RVGAAKTFFH RVEPPNKVSF HLNPAASEVS KAIVEKFHYY LPVTSKVSGS GSSSSRVSVF GKVKALIRGK FPTMRRPPSP
601: LQHQRSETTV SELLQIVSLL LAPKEAVAER EEMVSRKKAK KVKPGRWGCD GGCSSSWQLG LPGKGSNKGI SSMFLSGKWA FLTSALAAVR APGPCNHL
101: QKRAVGMKKT LVYYRGRAPH GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEQPQWT PSSVERSPTP CDGRGGGDDF
201: ESSSFSFPTE APMTSGSMHG GGFGMQMMGG MPQEDGRWMQ FLSEDAFNAT NPYFMNPAAA SNFSCLPSKV DVALECARLQ HRLALPPLEV EDFPHDVSLD
301: TKTGILQSNP NEVDILQEFL SVASASQELI NGSGSSSYPD MWLGAGTSSG GGHYMNELSS LVDLGAAKAK EEVDNFYHMC GIGASMMRRD DEPGRLVEIS
401: DMQEFKEEKK RPVENLRGVK LVNNDLGEIV VEGDESNPAE GITHYPIQDT SENSGEAGHH MTDHTTDEGG IDTAPIFSQS QPDDFALAIG FDNDGDDNTD
501: PNASFDLYGK VDVQRGLFVS RVGAAKTFFH RVEPPNKVSF HLNPAASEVS KAIVEKFHYY LPVTSKVSGS GSSSSRVSVF GKVKALIRGK FPTMRRPPSP
601: LQHQRSETTV SELLQIVSLL LAPKEAVAER EEMVSRKKAK KVKPGRWGCD GGCSSSWQLG LPGKGSNKGI SSMFLSGKWA FLTSALAAVR APGPCNHL
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.