Factsheet for TraesCS2D01G568000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G561700.1	Wheat	nucleus	76.55	78.54
TraesCS5D01G360800.1	Wheat	nucleus	21.15	42.4
TraesCS5D01G360700.1	Wheat	nucleus	22.99	38.61
TraesCS1D01G194200.2	Wheat	cytosol, nucleus, plastid	20.92	24.8
TraesCS2D01G567000.1	Wheat	cytosol	22.3	23.89
TraesCS1D01G266500.1	Wheat	nucleus	21.15	23.29
TraesCS3D01G183900.2	Wheat	cytosol	19.77	17.2
TraesCS6D01G390200.1	Wheat	cytosol, nucleus, peroxisome	24.14	16.36
TraesCS7D01G283800.1	Wheat	nucleus	23.45	15.79
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	25.06	15.62
TraesCS5D01G279100.2	Wheat	nucleus, peroxisome, plastid	20.46	13.03
TraesCS7D01G295100.1	Wheat	nucleus	20.0	12.52

Protein Annotations

EnsemblPlants:TraesCS2D01G568000.1	EnsemblPlantsGene:TraesCS2D01G568000	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PANTHER:PTHR31989
PANTHER:PTHR31989:SF14	PFAM:PF02365	PFscan:PS51005	SUPFAM:SSF101941	MapMan:15.5.17	:

Description

No Description!

Coordinates

chr2D:+:636097695..636099996

Molecular Weight (calculated)

48400.7 Da

IEP (calculated)

4.389

GRAVY (calculated)

-0.485

Length

435 amino acids

Sequence
(BLAST)

001: MACVSVPAAT AEMERAFSHL RPGFRFHPTD QELVGFFLRR KVLLGHGGFI PEVDLYKFEP HHLPAISFSP STSDPGAKVE WYFFAPRGRK YPTGFRMVRA
101: TVKGFWKSTG KDRPVMHNGI VVGMKKTLVF HMGQAPGGTR TDWVMHEYRL HGHRNNHIED TYALCRVFNK NMASPSMNAS GDADTDEDLM QFMPSVIDIG
201: KDLMEYVSDG TGLHKDPKHF VLGNVSTDKD MMEYGSCSTD SNKDLNKFML DSVDSVQDLM QSMLDGIGTD KDPIQVQVES DGADAENDFM QSVFGGVGAD
301: MDLIHVESES DVANANKDLM QYTLGGGGTN KNHIHVEFVS DEADTDKDVM QFAFGGMGTY QNPIQIESEV DGVDIDEGEK QFLTDGDDTG NGEMPILADG
401: DNSWYTKYLE EEDNSWTQFP FTDVLYTGDD MGMIP

Best Arabidopsis Sequence Match ( AT1G54330.1 )
(BLAST)

001: MAPMSLPPGF RFHPTDEELV AYYLDRKVNG QAIELEIIPE VDLYKCEPWD LPEKSFLPGN DMEWYFYSTR DKKYPNGSRT NRATRAGYWK ATGKDRTVES
101: KKMKMGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHAPSSS LKESYALCRV FKKNIQIPKR KGEEEEAEEE STSVGKEEEE EKEKKWRKCD GNYIEDESLK
201: RASAETSSSE LTQGVLLDEA NSSSIFALHF SSSLLDDHDH LFSNYSHQLP YHPPLQLQDF PQLSMNEAEI MSIQQDFQCR DSMNGTLDEI FSSSATFPAS
301: L

Arabidopsis Description

ANAC020NAC domain containing protein 20 [Source:UniProtKB/TrEMBL;Acc:Q67Z40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.