Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G196900.1 | Wheat | nucleus | 98.45 | 98.91 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 95.67 | 95.67 |
| TraesCSU01G135000.1 | Wheat | nucleus | 98.45 | 89.7 |
| Os08t0562200-02 | Rice | nucleus | 76.78 | 75.61 |
| OQU80699 | Sorghum | plastid | 77.09 | 74.33 |
| Zm00001d031898_P001 | Maize | plastid | 75.85 | 73.35 |
| Zm00001d049913_P001 | Maize | plastid | 72.14 | 73.04 |
| CDY70627 | Canola | cytosol | 16.56 | 64.85 |
| KRH34662 | Soybean | cytosol | 8.67 | 61.54 |
| CDY41351 | Canola | plastid | 15.79 | 61.08 |
| TraesCS5D01G360800.1 | Wheat | nucleus | 15.33 | 45.62 |
| TraesCS5D01G360700.1 | Wheat | nucleus | 15.79 | 39.38 |
| PGSC0003DMT400079789 | Potato | cytosol, nucleus, plastid | 29.88 | 35.54 |
| Solyc11g008000.1.1 | Tomato | nucleus | 28.95 | 35.42 |
| PGSC0003DMT400060087 | Potato | nucleus | 20.9 | 34.53 |
| PGSC0003DMT400060090 | Potato | nucleus | 28.48 | 34.39 |
| Solyc05g055470.2.1 | Tomato | nucleus | 28.95 | 34.38 |
| PGSC0003DMT400079791 | Potato | nucleus | 21.05 | 34.0 |
| Solyc05g055480.2.1 | Tomato | nucleus | 20.28 | 33.94 |
| VIT_13s0019g05230.t01 | Wine grape | nucleus | 22.29 | 33.33 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 28.79 | 33.27 |
| Bra034118.1-P | Field mustard | nucleus | 21.52 | 33.02 |
| CDY41352 | Canola | nucleus | 21.36 | 32.78 |
| AT3G10500.1 | Thale cress | cytosol, nucleus, vacuole | 27.71 | 32.6 |
| Bra028790.1-P | Field mustard | cytosol, nucleus, plastid | 25.23 | 32.34 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 26.63 | 32.03 |
| Bra034120.1-P | Field mustard | cytosol, nucleus, plastid | 26.63 | 32.03 |
| TraesCS1D01G266500.1 | Wheat | nucleus | 19.5 | 31.9 |
| Bra034119.1-P | Field mustard | nucleus | 21.67 | 31.82 |
| TraesCS2D01G567000.1 | Wheat | cytosol | 19.97 | 31.77 |
| CDY41353 | Canola | nucleus | 21.67 | 31.75 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 31.42 | 31.62 |
| AT3G10490.2 | Thale cress | nucleus | 21.98 | 31.49 |
| Bra009456.1-P | Field mustard | cytosol, nucleus, plastid | 26.93 | 31.41 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 26.78 | 31.23 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 27.4 | 31.22 |
| Bra001366.1-P | Field mustard | nucleus | 20.28 | 31.12 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 26.93 | 31.07 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 24.77 | 31.01 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 26.63 | 30.94 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 24.77 | 30.83 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 26.63 | 30.39 |
| CDY00676 | Canola | nucleus | 20.12 | 30.37 |
| Bra005804.1-P | Field mustard | cytosol, nucleus, vacuole | 26.47 | 30.16 |
| Bra001365.1-P | Field mustard | nucleus | 19.97 | 29.93 |
| CDX73920 | Canola | nucleus | 20.59 | 29.75 |
| CDY00946 | Canola | nucleus | 20.59 | 29.49 |
| Bra029844.1-P | Field mustard | nucleus, plastid | 20.74 | 29.45 |
| CDY00677 | Canola | nucleus | 20.28 | 29.44 |
| KRG92121 | Soybean | cytosol | 27.4 | 29.3 |
| KRH34660 | Soybean | plastid | 21.05 | 29.25 |
| Solyc11g008010.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 21.05 | 29.25 |
| CDY08601 | Canola | nucleus, plastid | 20.59 | 29.23 |
| KRG92124 | Soybean | nucleus | 20.59 | 28.6 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 26.01 | 28.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.74 | 28.03 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 25.85 | 27.83 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 19.5 | 27.63 |
| AT3G10480.3 | Thale cress | plastid | 21.83 | 26.81 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 26.01 | 26.21 |
| CDY70628 | Canola | golgi | 15.79 | 25.76 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 14.4 | 25.34 |
| TraesCS3D01G183900.2 | Wheat | cytosol | 18.89 | 24.4 |
| TraesCS2D01G568000.1 | Wheat | nucleus | 15.79 | 23.45 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 20.74 | 19.2 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 19.66 | 18.59 |
| TraesCS7D01G295100.1 | Wheat | nucleus | 16.41 | 15.25 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF14 | SUPFAM:SSF101941 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7D01G283800 | EnsemblPlants:TraesCS7D01G283800.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:296496930..296503585
Molecular Weight (calculated)
70474.0 Da
IEP (calculated)
4.421
GRAVY (calculated)
-0.428
Length
646 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHPSSSSSS APAAAPDDPT SLAPGFRFHP TDEELVSYYL KRKVLGRPLK VDAIAEVDLY KVEPWDLPAR SRLRSRDSQW YFFSRLDRKH ANRARTNRAT
101: AGGYWKTTGK DREVRHGARV VGMKKTLVFH AGRAPKGERT NWVMHEYRLE GDGAAGIPQD SFVVCRIFQK AGPGPQNGAQ YGAPFVEEEW EADEDDDFGP
201: MPVQRDVFGE HEAPGAMEKG YLQMNDLIQD LAGQNENGSV VLPVSDTSNT SSHSEDVEGN SGDILNDPSL GSNFLQYIHP GEQNSPMLNE NMLSNANVGD
301: FLNSSSPNDE FLELKDLELP LGNDSTIWPS DGWAWKTAFP LDAVNGANNE VPLITGDQPF QPDELAQLLQ TLQDDSSQLG STMTDLPHSS ITNSVKPEDD
401: SLMYFDAPFD NSMFSDGFRQ TNGFLGSPAT ILSGIETLDD GIPYYDAMDD NLFNDMMCSV QQSAGSSSHV FNGPVLTQEV NNPNYTYSPT QKVVEPNFVA
501: GAPSSARLSE AGGQLNCVVL PDSQAKNGSM GKRFVKMLDS ISAPPAFAAE FPGKSLSGVH PNTISVSTEV ISIGSLTVAS RQGKWSFQKD EDMELLFSTG
601: FQPDNRIHCG GCNTVTAVLR GGFCLFFLSA IMLLVSYEVG LCIYGK
101: AGGYWKTTGK DREVRHGARV VGMKKTLVFH AGRAPKGERT NWVMHEYRLE GDGAAGIPQD SFVVCRIFQK AGPGPQNGAQ YGAPFVEEEW EADEDDDFGP
201: MPVQRDVFGE HEAPGAMEKG YLQMNDLIQD LAGQNENGSV VLPVSDTSNT SSHSEDVEGN SGDILNDPSL GSNFLQYIHP GEQNSPMLNE NMLSNANVGD
301: FLNSSSPNDE FLELKDLELP LGNDSTIWPS DGWAWKTAFP LDAVNGANNE VPLITGDQPF QPDELAQLLQ TLQDDSSQLG STMTDLPHSS ITNSVKPEDD
401: SLMYFDAPFD NSMFSDGFRQ TNGFLGSPAT ILSGIETLDD GIPYYDAMDD NLFNDMMCSV QQSAGSSSHV FNGPVLTQEV NNPNYTYSPT QKVVEPNFVA
501: GAPSSARLSE AGGQLNCVVL PDSQAKNGSM GKRFVKMLDS ISAPPAFAAE FPGKSLSGVH PNTISVSTEV ISIGSLTVAS RQGKWSFQKD EDMELLFSTG
601: FQPDNRIHCG GCNTVTAVLR GGFCLFFLSA IMLLVSYEVG LCIYGK
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
Arabidopsis Description
NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.