Factsheet for Os08t0562200-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80699	Sorghum	plastid	80.64	78.96
Zm00001d031898_P001	Maize	plastid	80.34	78.89
Zm00001d049913_P001	Maize	plastid	75.61	77.74
HORVU7Hr1G060310.1	Barley	nucleus	75.76	76.94
TraesCS7B01G196900.1	Wheat	nucleus	75.3	76.83
TraesCS7D01G283800.1	Wheat	nucleus	75.61	76.78
TraesCSU01G135000.1	Wheat	nucleus	74.85	69.25
CDY70627	Canola	cytosol	15.85	63.03
KRH34662	Soybean	cytosol	8.54	61.54
CDY41351	Canola	plastid	15.4	60.48
PGSC0003DMT400079789	Potato	cytosol, nucleus, plastid	30.03	36.28
Solyc11g008000.1.1	Tomato	nucleus	28.96	35.98
PGSC0003DMT400060087	Potato	nucleus	20.58	34.53
PGSC0003DMT400079791	Potato	nucleus	20.88	34.25
AT3G10500.1	Thale cress	cytosol, nucleus, vacuole	28.51	34.06
PGSC0003DMT400060090	Potato	nucleus	27.74	34.02
Solyc05g055480.2.1	Tomato	nucleus	19.97	33.94
Solyc05g055470.2.1	Tomato	nucleus	28.05	33.82
VIT_13s0019g05240.t01	Wine grape	cytosol, nucleus, plastid	28.51	33.45
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	25.61	33.33
Bra034118.1-P	Field mustard	nucleus	21.19	33.02
CDY41354	Canola	cytosol, nucleus, plastid	26.98	32.96
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	26.98	32.96
CDY41352	Canola	nucleus	21.04	32.78
CDY61762	Canola	cytosol, nucleus, plastid	25.91	32.76
Os02t0822400-01	Rice	nucleus	31.4	32.59
CDY14157	Canola	cytosol, nucleus, vacuole	25.46	32.36
VIT_13s0019g05230.t01	Wine grape	nucleus	21.19	32.18
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	27.13	32.13
CDX70227	Canola	cytosol, nucleus, vacuole	26.98	31.95
CDY58437	Canola	cytosol, nucleus, plastid	26.98	31.83
Bra034119.1-P	Field mustard	nucleus	21.34	31.82
CDY44853	Canola	cytosol, nucleus, vacuole	27.13	31.79
CDY41353	Canola	nucleus	21.34	31.75
CDY11289	Canola	cytosol, nucleus, vacuole	26.98	31.27
Bra001366.1-P	Field mustard	nucleus	19.97	31.12
AT5G04410.1	Thale cress	cytosol, nucleus, plastid	26.83	31.04
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	26.83	31.04
AT3G10490.2	Thale cress	nucleus	21.19	30.82
CDY00676	Canola	nucleus	19.82	30.37
Bra001365.1-P	Field mustard	nucleus	19.82	30.16
CDY00946	Canola	nucleus	20.73	30.16
Bra029844.1-P	Field mustard	nucleus, plastid	20.88	30.11
CDY08601	Canola	nucleus, plastid	20.73	29.89
CDX73920	Canola	nucleus	20.27	29.75
Solyc11g008010.1.1	Tomato	endoplasmic reticulum, plasma membrane	21.04	29.68
KRH34660	Soybean	plastid	20.88	29.46
CDY00677	Canola	nucleus	19.97	29.44
KRG92124	Soybean	nucleus	20.73	29.25
KRG92121	Soybean	cytosol	26.52	28.81
CDX73921	Canola	cytosol, nucleus, plastid	19.51	28.07
GSMUA_Achr9P23580_001	Banana	plastid	25.15	27.82
Os05t0426200-02	Rice	nucleus	18.6	27.17
Os09t0552800-00	Rice	nucleus	15.09	27.05
AT3G10480.3	Thale cress	plastid	21.65	27.0
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	24.54	26.83
GSMUA_AchrUn_...	Banana	nucleus	19.51	26.78
GSMUA_Achr2P04010_001	Banana	plastid	25.61	26.21
CDY70628	Canola	golgi	15.7	26.01
Os01t0261200-01	Rice	cytosol	17.84	23.93
Os03t0119966-01	Rice	nucleus	20.73	20.92
Os09t0493700-01	Rice	nucleus	19.05	17.81
Os08t0157900-01	Rice	nucleus, plasma membrane	17.23	15.5

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4346333	EMBL:AK099629	EMBL:AK120773	ProteinID:BAD09611.1
ProteinID:BAD13226.1	ProteinID:BAF24432.1	ProteinID:BAT06714.1	ProteinID:EAZ43669.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093	EMBL:KF280262
InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os08g0562200	EnsemblPlants:Os08t0562200-02	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF14	UniProt:Q6YYW2	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI000023AEA1
RefSeq:XP_015649510.1	SEG:seg	:	:	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 40Similar to CUC2. (Os08t0562200-02);Hypothetical conserved gene. (Os08t0562200-03)

Coordinates

chr8:-:28144876..28149227

Molecular Weight (calculated)

71941.3 Da

IEP (calculated)

4.338

GRAVY (calculated)

-0.459

Length

656 amino acids

Sequence
(BLAST)

001: MSHPSSSSSS APPAAAEATS LAPGFRFHPT DEELVSYYLK RKVHGRPLKV DAIAEVDLYK VEPWDLPARS RLRSRDSQWY FFSRLDRKHA NRARTNRATA
101: GGYWKTTGKD REVRNGPTTV GMKKTLVFHA GRAPKGERTN WVMHEYRLDG QTTIPPQDSF VVCRIFQKAG PGPQNGAQYG APFVEEEWEE DDEDVGLLPV
201: EEKDNSDDQE KEISGAMEKG YLQMSDLVQN LVDQNENGTI ALPVSDNSNN SNHSEDVDGN SGDILSDQNL GSNFLHHVEP VEQNGLVLNE NMFSSANAGD
301: LFNISSPNDG FLELKDFADI ADLENPLANE STIWPSDGWP WKSTDSMEAV NGASNEFSPL AGEQIFQPEE LEQLLQSLQE DSHMGSTISD PPHSSITNLA
401: KPEEDCLMFY DAPFDSSMCD DGFRQLNGFL GSPSTNLSGI DMVDDGMPYY DAMDDNLFND LLSSVQPSAG SSSHAFSGPV LTQEVNNSTY TYSPTQKVLE
501: PNFVVGAPSS ARLPEAGSQL NYVVLPDSQT KSSLIGKRFV KILDSISAPP AFAAAEFPAS LRKSLAPISG AHHNTIRVSA EVISIGSLTP DSQDKWSLEK
601: DEGMELLFSA GFEPDTRVHF GCNTITAVLR GGFCLFFFSA IMLLVSYEVG MCIYGK

Best Arabidopsis Sequence Match ( AT5G04410.1 )
(BLAST)

001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR

Arabidopsis Description

NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.