Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70227 | Canola | cytosol, nucleus, vacuole | 93.57 | 94.58 |
| Bra009456.1-P | Field mustard | cytosol, nucleus, plastid | 93.21 | 94.22 |
| CDY70627 | Canola | cytosol | 24.64 | 83.64 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 81.43 | 82.01 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 82.14 | 81.13 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 74.11 | 80.43 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 81.07 | 80.21 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 73.75 | 79.58 |
| KRH34662 | Soybean | cytosol | 10.54 | 64.84 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 60.89 | 63.5 |
| CDY41351 | Canola | plastid | 18.39 | 61.68 |
| CDY71253 | Canola | cytosol | 15.71 | 49.44 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 47.5 | 47.59 |
| Solyc05g055470.2.1 | Tomato | nucleus | 44.29 | 45.59 |
| CDX95832 | Canola | nucleus | 18.21 | 45.13 |
| CDX92153 | Canola | nucleus | 18.04 | 44.69 |
| PGSC0003DMT400060090 | Potato | nucleus | 42.5 | 44.49 |
| Solyc11g008000.1.1 | Tomato | nucleus | 41.43 | 43.94 |
| PGSC0003DMT400079789 | Potato | cytosol, nucleus, plastid | 42.14 | 43.46 |
| CDX81124 | Canola | nucleus | 22.86 | 37.43 |
| CDY44793 | Canola | nucleus | 22.5 | 36.0 |
| CDX77674 | Canola | nucleus | 18.21 | 35.92 |
| CDY63046 | Canola | nucleus | 18.39 | 35.52 |
| CDY10502 | Canola | nucleus | 19.46 | 35.5 |
| CDY42413 | Canola | nucleus | 19.29 | 34.95 |
| CDY43785 | Canola | nucleus | 21.43 | 34.88 |
| CDY46459 | Canola | nucleus | 18.93 | 34.87 |
| CDX84485 | Canola | nucleus | 21.43 | 34.68 |
| CDY41353 | Canola | nucleus | 26.96 | 34.24 |
| CDX67739 | Canola | nucleus | 18.93 | 34.08 |
| CDY41352 | Canola | nucleus | 25.54 | 33.97 |
| CDY59580 | Canola | nucleus | 17.68 | 33.67 |
| CDX90431 | Canola | nucleus | 17.14 | 33.57 |
| CDY01508 | Canola | nucleus | 17.14 | 33.57 |
| CDY00676 | Canola | nucleus | 25.54 | 33.41 |
| CDX87703 | Canola | nucleus | 17.5 | 33.33 |
| KRG92121 | Soybean | cytosol | 35.71 | 33.11 |
| CDY44498 | Canola | nucleus | 17.14 | 32.88 |
| CDX78816 | Canola | nucleus | 16.96 | 32.53 |
| CDX84070 | Canola | nucleus | 16.25 | 32.16 |
| CDY00946 | Canola | nucleus | 25.71 | 31.93 |
| CDY66060 | Canola | nucleus | 16.25 | 31.82 |
| CDY67205 | Canola | nucleus | 16.25 | 31.82 |
| CDY08601 | Canola | nucleus, plastid | 25.71 | 31.65 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 25.36 | 31.14 |
| CDX86970 | Canola | nucleus | 17.32 | 30.7 |
| CDX78356 | Canola | nucleus | 19.64 | 30.3 |
| CDY00677 | Canola | nucleus | 23.75 | 29.89 |
| CDX73920 | Canola | nucleus | 23.75 | 29.75 |
| CDY21575 | Canola | nucleus | 22.86 | 29.49 |
| CDX69911 | Canola | nucleus | 23.04 | 29.45 |
| CDY70628 | Canola | golgi | 20.54 | 29.04 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 31.43 | 27.46 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 31.43 | 27.41 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 31.43 | 27.33 |
| EES06041 | Sorghum | nucleus | 31.79 | 27.3 |
| Os08t0562200-02 | Rice | nucleus | 31.79 | 27.13 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 31.07 | 27.06 |
| Zm00001d049913_P001 | Maize | plastid | 30.71 | 26.96 |
| TraesCS7D01G283800.1 | Wheat | nucleus | 31.07 | 26.93 |
| Os02t0822400-01 | Rice | nucleus | 30.36 | 26.9 |
| OQU80699 | Sorghum | plastid | 31.96 | 26.72 |
| CDY04487 | Canola | cytosol | 16.43 | 26.67 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 30.71 | 26.63 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 16.25 | 26.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.5 | 26.36 |
| Zm00001d031898_P001 | Maize | plastid | 31.07 | 26.05 |
| CDY09128 | Canola | cytosol | 15.89 | 25.95 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 15.89 | 25.95 |
| Zm00001d051879_P001 | Maize | nucleus | 30.36 | 25.88 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 15.54 | 25.74 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 27.5 | 25.67 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 15.54 | 25.66 |
| CDX88803 | Canola | cytosol | 15.36 | 25.52 |
| CDX70995 | Canola | cytosol | 15.18 | 25.45 |
| CDX92368 | Canola | cytosol | 15.18 | 25.37 |
| CDY43143 | Canola | nucleus | 21.61 | 25.31 |
| TraesCSU01G135000.1 | Wheat | nucleus | 31.61 | 24.96 |
| CDY28745 | Canola | cytosol | 21.25 | 24.9 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 26.25 | 24.79 |
| CDY25752 | Canola | nucleus | 22.32 | 24.56 |
| CDY49932 | Canola | nucleus | 20.89 | 24.43 |
| CDY16943 | Canola | nucleus | 21.61 | 24.35 |
| CDX70745 | Canola | cytosol | 21.43 | 24.29 |
| CDX78734 | Canola | cytosol | 21.07 | 24.08 |
| CDY00208 | Canola | nucleus | 18.57 | 24.07 |
| CDY05939 | Canola | nucleus | 19.29 | 23.33 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 26.61 | 23.24 |
| CDY12515 | Canola | plastid | 22.5 | 23.12 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 26.43 | 23.09 |
| CDX73305 | Canola | nucleus | 21.07 | 22.65 |
| CDY08139 | Canola | nucleus | 18.75 | 22.63 |
| CDY60870 | Canola | nucleus | 23.21 | 22.53 |
| CDX93723 | Canola | nucleus | 22.32 | 22.48 |
| CDY19828 | Canola | nucleus | 17.68 | 22.25 |
| CDX88115 | Canola | cytosol | 17.5 | 22.12 |
| CDY16427 | Canola | nucleus | 23.39 | 22.02 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 21.43 | 21.98 |
| CDY34716 | Canola | nucleus | 11.43 | 21.77 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 21.79 | 21.67 |
| CDX80455 | Canola | nucleus | 17.5 | 21.49 |
| CDX91785 | Canola | nucleus | 20.54 | 21.34 |
| CDY28397 | Canola | nucleus | 21.79 | 21.11 |
| CDX73304 | Canola | nucleus | 21.79 | 20.93 |
| CDY21216 | Canola | nucleus | 15.54 | 20.23 |
| CDY66161 | Canola | nucleus | 19.46 | 17.17 |
| CDY26922 | Canola | nucleus | 19.29 | 16.98 |
| CDX69392 | Canola | nucleus | 9.29 | 12.15 |
| CDX87118 | Canola | nucleus | 17.32 | 11.66 |
| CDX86969 | Canola | cytosol | 1.25 | 6.54 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078I6U4 | UniProt:A0A078I6U4 | EnsemblPlants:CDY44853 | ProteinID:CDY44853 |
| ProteinID:CDY44853.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00080904001 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF43 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EECC40 |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g50530DBnaC09g50530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6U4]
Coordinates
chrLK032604:+:48811..51316
Molecular Weight (calculated)
62793.7 Da
IEP (calculated)
4.305
GRAVY (calculated)
-0.667
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGSATSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRAVGM KKTLVYHKGR APRGERTNWV MHEYRLTDEE LKRAGAPQDA FVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDKMTFVPEQ DALSEGLAVD
201: DDVYVDIDEI DEKPENLVVY DAIPVQTNYC HGDSSNNAES GNCEDSGNYI QPGNYAVDSG GYIKQPTETF EEDQKPIIRD CCIQPCSLYP NEQIGCGVQD
301: QHEENIETSN NNDFVADPCY SDIPIETNYL PDEPFMDPSN NLQLCDDLYL ETNDLSGGGL QDDFNFEDYL NFFDDEDAQN LTLGVSQLLG SQDAPPEQES
401: LDQKPSPEEL EKEVVVEKKE SGEGSSSKQD ADVTDFDSDS KYPFLKKSSH MFGVPPSFAS QFQTKDAAIR LHAAQSSGSV HVTAGMIRIS NMTPAVDSDM
501: GWANGANDKN GDLSVVLSFG LVQRDDAMSK TATRAMLVFL CLWVLLLSVS FKIVTMVSAR
101: IRNGSRAVGM KKTLVYHKGR APRGERTNWV MHEYRLTDEE LKRAGAPQDA FVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDKMTFVPEQ DALSEGLAVD
201: DDVYVDIDEI DEKPENLVVY DAIPVQTNYC HGDSSNNAES GNCEDSGNYI QPGNYAVDSG GYIKQPTETF EEDQKPIIRD CCIQPCSLYP NEQIGCGVQD
301: QHEENIETSN NNDFVADPCY SDIPIETNYL PDEPFMDPSN NLQLCDDLYL ETNDLSGGGL QDDFNFEDYL NFFDDEDAQN LTLGVSQLLG SQDAPPEQES
401: LDQKPSPEEL EKEVVVEKKE SGEGSSSKQD ADVTDFDSDS KYPFLKKSSH MFGVPPSFAS QFQTKDAAIR LHAAQSSGSV HVTAGMIRIS NMTPAVDSDM
501: GWANGANDKN GDLSVVLSFG LVQRDDAMSK TATRAMLVFL CLWVLLLSVS FKIVTMVSAR
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
Arabidopsis Description
NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.