Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93723 | Canola | nucleus | 91.12 | 92.27 |
| CDX91785 | Canola | nucleus | 77.62 | 81.08 |
| CDY46459 | Canola | nucleus | 41.74 | 77.3 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 74.78 | 77.11 |
| CDX73305 | Canola | nucleus | 68.74 | 74.28 |
| CDY28397 | Canola | nucleus | 68.38 | 66.61 |
| CDX73304 | Canola | nucleus | 68.03 | 65.69 |
| CDY70627 | Canola | cytosol | 15.45 | 52.73 |
| CDY41351 | Canola | plastid | 13.68 | 46.11 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 44.41 | 43.71 |
| CDY71253 | Canola | cytosol | 13.32 | 42.13 |
| CDY25752 | Canola | nucleus | 36.06 | 39.88 |
| CDX95832 | Canola | nucleus | 15.99 | 39.82 |
| CDX92153 | Canola | nucleus | 15.81 | 39.38 |
| Solyc04g072220.2.1 | Tomato | cytosol, nucleus, plastid | 41.56 | 39.07 |
| PGSC0003DMT400043681 | Potato | nucleus | 40.14 | 38.57 |
| Solyc12g056790.1.1 | Tomato | nucleus | 40.32 | 38.47 |
| CDY12515 | Canola | plastid | 36.59 | 37.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.86 | 32.51 |
| CDX77674 | Canola | nucleus | 16.34 | 32.39 |
| CDY63046 | Canola | nucleus | 16.52 | 32.07 |
| CDY10502 | Canola | nucleus | 17.41 | 31.92 |
| CDX90431 | Canola | nucleus | 16.16 | 31.82 |
| CDY01508 | Canola | nucleus | 15.99 | 31.47 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 32.5 | 31.18 |
| CDY59580 | Canola | nucleus | 16.16 | 30.95 |
| CDX67739 | Canola | nucleus | 17.05 | 30.87 |
| CDY44498 | Canola | nucleus | 15.99 | 30.82 |
| CDY66060 | Canola | nucleus | 15.63 | 30.77 |
| CDY67205 | Canola | nucleus | 15.63 | 30.77 |
| CDY42413 | Canola | nucleus | 16.87 | 30.74 |
| CDX87703 | Canola | nucleus | 15.99 | 30.61 |
| CDX78816 | Canola | nucleus | 15.81 | 30.48 |
| CDX84070 | Canola | nucleus | 15.1 | 30.04 |
| CDX81124 | Canola | nucleus | 17.94 | 29.53 |
| CDY44793 | Canola | nucleus | 18.12 | 29.14 |
| CDX86970 | Canola | nucleus | 16.16 | 28.8 |
| CDX84485 | Canola | nucleus | 17.58 | 28.61 |
| CDY43785 | Canola | nucleus | 17.41 | 28.49 |
| PGSC0003DMT400079995 | Potato | nucleus | 42.63 | 26.64 |
| CDY41352 | Canola | nucleus | 19.36 | 25.89 |
| CDY00676 | Canola | nucleus | 19.36 | 25.47 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 15.45 | 25.22 |
| Os09t0493700-01 | Rice | nucleus | 31.26 | 25.07 |
| CDY04487 | Canola | cytosol | 15.28 | 24.93 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 30.2 | 24.89 |
| KXG35937 | Sorghum | nucleus | 31.26 | 24.82 |
| CDY41353 | Canola | nucleus | 19.36 | 24.72 |
| CDY00677 | Canola | nucleus | 19.36 | 24.49 |
| CDY00946 | Canola | nucleus | 19.54 | 24.39 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 31.62 | 24.38 |
| CDX88803 | Canola | cytosol | 14.56 | 24.33 |
| CDX70995 | Canola | cytosol | 14.39 | 24.25 |
| CDY08601 | Canola | nucleus, plastid | 19.54 | 24.18 |
| CDX73920 | Canola | nucleus | 19.18 | 24.16 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 19.54 | 24.12 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 32.33 | 24.01 |
| CDY21575 | Canola | nucleus | 18.47 | 23.96 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 22.56 | 23.65 |
| CDY28745 | Canola | cytosol | 20.07 | 23.64 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 14.21 | 23.6 |
| CDX78356 | Canola | nucleus | 15.1 | 23.42 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 14.03 | 23.37 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 14.21 | 23.32 |
| CDY09128 | Canola | cytosol | 14.21 | 23.32 |
| CDX69911 | Canola | nucleus | 18.12 | 23.29 |
| CDX92368 | Canola | cytosol | 13.85 | 23.28 |
| CDY43143 | Canola | nucleus | 19.72 | 23.22 |
| CDY49932 | Canola | nucleus | 19.54 | 22.96 |
| CDY16943 | Canola | nucleus | 20.25 | 22.94 |
| CDY00208 | Canola | nucleus | 17.58 | 22.92 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 22.38 | 22.66 |
| CDX78734 | Canola | cytosol | 19.72 | 22.65 |
| CDY19828 | Canola | nucleus | 17.76 | 22.47 |
| CDX70745 | Canola | cytosol | 19.72 | 22.47 |
| CDX88115 | Canola | cytosol | 17.58 | 22.35 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 21.85 | 22.2 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 22.2 | 22.08 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 21.67 | 21.79 |
| CDX80455 | Canola | nucleus | 17.58 | 21.71 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 19.89 | 21.71 |
| CDY05939 | Canola | nucleus | 17.76 | 21.6 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 19.89 | 21.58 |
| CDY70628 | Canola | golgi | 14.74 | 20.96 |
| CDY08139 | Canola | nucleus | 17.05 | 20.69 |
| CDY60870 | Canola | nucleus | 20.25 | 19.76 |
| CDY34716 | Canola | nucleus | 10.12 | 19.39 |
| CDY16427 | Canola | nucleus | 20.07 | 18.99 |
| CDY21216 | Canola | nucleus | 14.21 | 18.6 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 18.65 | 17.89 |
| CDY26922 | Canola | nucleus | 19.89 | 17.61 |
| CDY66161 | Canola | nucleus | 19.54 | 17.32 |
| CDX87118 | Canola | nucleus | 17.58 | 11.9 |
| CDX69392 | Canola | nucleus | 8.7 | 11.45 |
| CDX86969 | Canola | cytosol | 1.6 | 8.41 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078IF60 | UniProt:A0A078IF60 | EnsemblPlants:CDY48632 | ProteinID:CDY48632 |
| ProteinID:CDY48632.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00091404001 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF27 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EDDB57 |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g08090DBnaC06g08090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IF60]
Coordinates
chrLK032783:+:66974..69410
Molecular Weight (calculated)
62908.4 Da
IEP (calculated)
4.498
GRAVY (calculated)
-0.448
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSCLKGGK FSAPGFRFHP TDEELVMYYL KRKICKRRLR VNAIGVVDVY KLDPEELPGQ SVLKTGDRQW FYFTPRNRKY PNAARSGRGT ATGYWKATGK
101: DRVIVYNSRS VGLKKTLVFY RGRAPNGERT DWVMHEYTMD EQELGRCKNA KEYYALYKLF KKSGAGPKNG EDYGAPFQEE EWVDDDYEVA VPEEPVVRFE
201: DTPRVDNATL FNPVNVQLDD IDEILNGIPY APGVPQTCFN GLASSFPQVN DLLPYVPLFH LFFVNNSSGE FLPNVQPYNM PSTFESTEVT SVPNDSGVGP
301: FVFEQEDYIE MDDLLTSELG ASSTEKPEQF LDPGEFREFN EFDQLFHDVS MFLDMEPILQ GTSADPSSLS NFAHTSDQED QSLYQQFQDQ TPENKLNNIM
401: DPNPNLSQFT DNLWFQDDYQ AVLFDQPQSI ISGAFASPSS GVDVIPGSTN LTTSVTAQDQ EGENGGGGTS PFSSALWAFM DSIPSTPASA CEGPINRTFV
501: RMSSFSRMRF SGKANGTPAT TTVVAKKRSR NRGFLVLSIV GALCAIFWVF IATVRASGRP VFS
101: DRVIVYNSRS VGLKKTLVFY RGRAPNGERT DWVMHEYTMD EQELGRCKNA KEYYALYKLF KKSGAGPKNG EDYGAPFQEE EWVDDDYEVA VPEEPVVRFE
201: DTPRVDNATL FNPVNVQLDD IDEILNGIPY APGVPQTCFN GLASSFPQVN DLLPYVPLFH LFFVNNSSGE FLPNVQPYNM PSTFESTEVT SVPNDSGVGP
301: FVFEQEDYIE MDDLLTSELG ASSTEKPEQF LDPGEFREFN EFDQLFHDVS MFLDMEPILQ GTSADPSSLS NFAHTSDQED QSLYQQFQDQ TPENKLNNIM
401: DPNPNLSQFT DNLWFQDDYQ AVLFDQPQSI ISGAFASPSS GVDVIPGSTN LTTSVTAQDQ EGENGGGGTS PFSSALWAFM DSIPSTPASA CEGPINRTFV
501: RMSSFSRMRF SGKANGTPAT TTVVAKKRSR NRGFLVLSIV GALCAIFWVF IATVRASGRP VFS
001: MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD
Arabidopsis Description
NAC017NAC017 [Source:UniProtKB/TrEMBL;Acc:A0A178WNW4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.