Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00208 | Canola | nucleus | 88.78 | 21.99 |
| CDY08139 | Canola | nucleus | 74.77 | 17.24 |
| CDY05939 | Canola | nucleus | 71.96 | 16.63 |
| CDX80455 | Canola | nucleus | 49.53 | 11.62 |
| CDX88115 | Canola | cytosol | 47.66 | 11.51 |
| CDY19828 | Canola | nucleus | 46.73 | 11.24 |
| CDX87118 | Canola | nucleus | 46.73 | 6.01 |
| HORVU0Hr1G021100.1 | Barley | cytosol, plastid | 16.82 | 3.16 |
| CDY66161 | Canola | nucleus | 12.15 | 2.05 |
| CDY26922 | Canola | nucleus | 12.15 | 2.04 |
| CDY28397 | Canola | nucleus | 9.35 | 1.73 |
| CDX73304 | Canola | nucleus | 9.35 | 1.72 |
| CDY43143 | Canola | nucleus | 7.48 | 1.67 |
| CDY28745 | Canola | cytosol | 7.48 | 1.67 |
| CDX93723 | Canola | nucleus | 8.41 | 1.62 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 8.41 | 1.6 |
| CDY70628 | Canola | golgi | 5.61 | 1.52 |
| CDX91785 | Canola | nucleus | 7.48 | 1.48 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 7.48 | 1.47 |
| CDY41352 | Canola | nucleus | 5.61 | 1.43 |
| CDY00676 | Canola | nucleus | 5.61 | 1.4 |
| CDY21216 | Canola | nucleus | 5.61 | 1.4 |
| CDY41353 | Canola | nucleus | 5.61 | 1.36 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 6.54 | 1.35 |
| CDY00677 | Canola | nucleus | 5.61 | 1.35 |
| CDX73920 | Canola | nucleus | 5.61 | 1.34 |
| CDY00946 | Canola | nucleus | 5.61 | 1.33 |
| CDY08601 | Canola | nucleus, plastid | 5.61 | 1.32 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 5.61 | 1.32 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 6.54 | 1.3 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 6.54 | 1.26 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 6.54 | 1.26 |
| CDY49932 | Canola | nucleus | 5.61 | 1.25 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 6.54 | 1.25 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 6.54 | 1.24 |
| CDX78734 | Canola | cytosol | 5.61 | 1.22 |
| CDY25752 | Canola | nucleus | 5.61 | 1.18 |
| CDY04487 | Canola | cytosol | 3.74 | 1.16 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 3.74 | 1.16 |
| CDX73305 | Canola | nucleus | 5.61 | 1.15 |
| CDX70745 | Canola | cytosol | 4.67 | 1.01 |
| CDY16943 | Canola | nucleus | 4.67 | 1.01 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 4.67 | 0.97 |
| CDX86970 | Canola | nucleus | 2.8 | 0.95 |
| CDX69392 | Canola | nucleus | 3.74 | 0.93 |
| CDY12515 | Canola | plastid | 4.67 | 0.92 |
| HORVU5Hr1G086780.2 | Barley | cytosol, nucleus | 1.87 | 0.9 |
| CDX70995 | Canola | cytosol | 2.8 | 0.9 |
| CDX92368 | Canola | cytosol | 2.8 | 0.9 |
| CDX88803 | Canola | cytosol | 2.8 | 0.89 |
| CDX77674 | Canola | nucleus | 1.87 | 0.7 |
| CDY01508 | Canola | nucleus | 1.87 | 0.7 |
| CDX90431 | Canola | nucleus | 1.87 | 0.7 |
| CDY21575 | Canola | nucleus | 2.8 | 0.69 |
| CDY63046 | Canola | nucleus | 1.87 | 0.69 |
| CDY44498 | Canola | nucleus | 1.87 | 0.68 |
| CDX69911 | Canola | nucleus | 2.8 | 0.68 |
| CDX78816 | Canola | nucleus | 1.87 | 0.68 |
| CDY59580 | Canola | nucleus | 1.87 | 0.68 |
| CDY34716 | Canola | nucleus | 1.87 | 0.68 |
| CDX87703 | Canola | nucleus | 1.87 | 0.68 |
| HORVU5Hr1G086730.1 | Barley | nucleus | 1.87 | 0.66 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 1.87 | 0.59 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 1.87 | 0.59 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 1.87 | 0.58 |
| CDY09128 | Canola | cytosol | 1.87 | 0.58 |
| CDY71253 | Canola | cytosol | 0.93 | 0.56 |
| CDX92153 | Canola | nucleus | 0.93 | 0.44 |
| CDX95832 | Canola | nucleus | 0.93 | 0.44 |
| CDY60870 | Canola | nucleus | 1.87 | 0.35 |
| CDY16427 | Canola | nucleus | 1.87 | 0.34 |
| CDY10502 | Canola | nucleus | 0.93 | 0.33 |
| CDY42413 | Canola | nucleus | 0.93 | 0.32 |
| CDX67739 | Canola | nucleus | 0.93 | 0.32 |
| CDX81124 | Canola | nucleus | 0.93 | 0.29 |
| CDY44793 | Canola | nucleus | 0.93 | 0.29 |
| CDX78356 | Canola | nucleus | 0.93 | 0.28 |
| CDY66060 | Canola | nucleus | 0.0 | 0.0 |
| CDY67205 | Canola | nucleus | 0.0 | 0.0 |
| CDY70627 | Canola | cytosol | 0.0 | 0.0 |
| CDY43785 | Canola | nucleus | 0.0 | 0.0 |
| CDX84070 | Canola | nucleus | 0.0 | 0.0 |
| CDY46459 | Canola | nucleus | 0.0 | 0.0 |
| CDX84485 | Canola | nucleus | 0.0 | 0.0 |
| CDY41351 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX86969 | EnsemblPlantsGene:GSBRNA2T00145795001 | GO:A0A078DF21 | ProteinID:CDX86969 | ProteinID:CDX86969.1 | TMHMM:TMhelix |
| UniParc:UPI0004EF1A4D | MapMan:35.1 | : | : | : | : |
Description
BnaC03g52390D
Coordinates
chrLK031848:+:974838..975478
Molecular Weight (calculated)
11999.8 Da
IEP (calculated)
10.684
GRAVY (calculated)
-0.093
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDDVSRTGI KLQPRRSGCS TDYIIHGNAA RRLRLQIIKR EEVEDTDGEA LKKGKLMRSK NRTGFLYKKI MSVRCSYGGL FRAAVVAVLF LISVCSLTTD
101: FRASVLI
101: FRASVLI
001: MNQNLHVLSM DSLPVGLRFR PTDEELIRYY LRRKINGHDD DVKAIREIDI CKWEPWDLPD FSVIKTKDSE WLYFCPLDRK YPSGSRQNRA TVAGYWKATG
101: KDRKIKSGKT NIIGVKRTLV FHAGRAPRGT RTNWIIHEYR ATEDDLSGTN PGQSPFVICK LFKKEELVLG EEDSKSDEVE EPAVSSPTVE VTKSEVSEVI
201: KTEDVKRHDI AESSLVISGD SHSDACDEAT TAELVDFKWY PELESLDFTL FSPLHSQVQS ELGSSYNTFQ PGSSNFSGNN NNSFQIQTQY GTNEVDTYIS
301: DFLDSILKSP DEDPEKHKYV LQSGFDVVAP DQIAQVCQQG SAVDMSNDVS VTGIQIKSRQ AQPSGYTNDY IAQGNGPRRL RLQSNFNGIN TKNPELQAIK
401: REAEDTVGES IKKRCGKLMR SKNVTGFVFK KITSVKCSYG GLFRAAVVAV VFLMSVCSLT VDFRASAVS
101: KDRKIKSGKT NIIGVKRTLV FHAGRAPRGT RTNWIIHEYR ATEDDLSGTN PGQSPFVICK LFKKEELVLG EEDSKSDEVE EPAVSSPTVE VTKSEVSEVI
201: KTEDVKRHDI AESSLVISGD SHSDACDEAT TAELVDFKWY PELESLDFTL FSPLHSQVQS ELGSSYNTFQ PGSSNFSGNN NNSFQIQTQY GTNEVDTYIS
301: DFLDSILKSP DEDPEKHKYV LQSGFDVVAP DQIAQVCQQG SAVDMSNDVS VTGIQIKSRQ AQPSGYTNDY IAQGNGPRRL RLQSNFNGIN TKNPELQAIK
401: REAEDTVGES IKKRCGKLMR SKNVTGFVFK KITSVKCSYG GLFRAAVVAV VFLMSVCSLT VDFRASAVS
Arabidopsis Description
NAC062NAC domain-containing protein 62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCK6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.