Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030807.1-P | Field mustard | nucleus | 99.35 | 99.35 |
| CDY10502 | Canola | nucleus | 94.17 | 94.79 |
| AT1G54330.1 | Thale cress | nucleus | 84.14 | 86.38 |
| CDX67739 | Canola | nucleus | 83.5 | 82.96 |
| CDY71253 | Canola | cytosol | 46.6 | 80.9 |
| VIT_19s0085g00950.t01 | Wine grape | nucleus | 51.46 | 56.58 |
| CDX92153 | Canola | nucleus | 39.16 | 53.54 |
| CDX95832 | Canola | nucleus | 39.16 | 53.54 |
| CDY70627 | Canola | cytosol | 28.16 | 52.73 |
| CDY41351 | Canola | plastid | 28.16 | 52.1 |
| KRH43662 | Soybean | nucleus | 51.13 | 45.4 |
| KRH13792 | Soybean | nucleus | 50.81 | 45.24 |
| CDX90431 | Canola | nucleus | 35.92 | 38.81 |
| CDY01508 | Canola | nucleus | 35.28 | 38.11 |
| CDX77674 | Canola | nucleus | 34.63 | 37.68 |
| CDY63046 | Canola | nucleus | 34.63 | 36.9 |
| CDX84070 | Canola | nucleus | 33.33 | 36.4 |
| CDY59580 | Canola | nucleus | 34.63 | 36.39 |
| CDX78816 | Canola | nucleus | 34.3 | 36.3 |
| CDY44498 | Canola | nucleus | 34.3 | 36.3 |
| CDX87703 | Canola | nucleus | 34.3 | 36.05 |
| CDY67205 | Canola | nucleus | 33.33 | 36.01 |
| CDY66060 | Canola | nucleus | 33.33 | 36.01 |
| CDY46459 | Canola | nucleus | 30.1 | 30.59 |
| CDX86970 | Canola | nucleus | 30.42 | 29.75 |
| CDX70745 | Canola | cytosol | 44.34 | 27.73 |
| CDY43785 | Canola | nucleus | 30.74 | 27.62 |
| CDX78734 | Canola | cytosol | 43.69 | 27.55 |
| CDX84485 | Canola | nucleus | 30.74 | 27.46 |
| CDY44793 | Canola | nucleus | 31.07 | 27.43 |
| CDY28745 | Canola | cytosol | 41.75 | 26.99 |
| CDY43143 | Canola | nucleus | 41.42 | 26.78 |
| CDY16943 | Canola | nucleus | 43.04 | 26.76 |
| CDX81124 | Canola | nucleus | 29.13 | 26.32 |
| CDY49932 | Canola | nucleus | 40.45 | 26.1 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 26.21 | 23.96 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 26.21 | 23.89 |
| CDY41352 | Canola | nucleus | 32.36 | 23.75 |
| CDX70995 | Canola | cytosol | 25.57 | 23.65 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 25.89 | 23.32 |
| CDY04487 | Canola | cytosol | 25.89 | 23.19 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 25.89 | 23.19 |
| CDX88803 | Canola | cytosol | 25.24 | 23.15 |
| CDY00676 | Canola | nucleus | 32.04 | 23.13 |
| CDY41353 | Canola | nucleus | 33.01 | 23.13 |
| CDY00946 | Canola | nucleus | 33.66 | 23.06 |
| CDY60870 | Canola | nucleus | 43.04 | 23.05 |
| CDY09128 | Canola | cytosol | 25.57 | 23.03 |
| CDY08601 | Canola | nucleus, plastid | 33.66 | 22.86 |
| CDY00208 | Canola | nucleus | 31.39 | 22.45 |
| CDY16427 | Canola | nucleus | 43.04 | 22.35 |
| CDX92368 | Canola | cytosol | 23.95 | 22.09 |
| CDX88115 | Canola | cytosol | 30.74 | 21.44 |
| CDY00677 | Canola | nucleus | 30.74 | 21.35 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 31.39 | 21.27 |
| CDX73920 | Canola | nucleus | 30.74 | 21.25 |
| CDX78356 | Canola | nucleus | 24.6 | 20.94 |
| CDX80455 | Canola | nucleus | 30.74 | 20.83 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 34.95 | 20.81 |
| CDY05939 | Canola | nucleus | 31.07 | 20.73 |
| CDY08139 | Canola | nucleus | 31.07 | 20.69 |
| CDY19828 | Canola | nucleus | 29.77 | 20.67 |
| CDX69911 | Canola | nucleus | 29.13 | 20.55 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 34.3 | 20.54 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 36.25 | 20.14 |
| CDY21575 | Canola | nucleus | 28.16 | 20.05 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 35.92 | 19.61 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 34.95 | 19.49 |
| CDY21216 | Canola | nucleus | 26.86 | 19.3 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 34.95 | 19.29 |
| CDY34716 | Canola | nucleus | 17.8 | 18.71 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 32.36 | 18.62 |
| CDY70628 | Canola | golgi | 23.62 | 18.43 |
| CDX73305 | Canola | nucleus | 30.1 | 17.85 |
| CDX91785 | Canola | nucleus | 30.74 | 17.63 |
| CDX93723 | Canola | nucleus | 31.39 | 17.45 |
| CDY25752 | Canola | nucleus | 28.16 | 17.09 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 30.1 | 17.03 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 30.74 | 16.87 |
| CDY28397 | Canola | nucleus | 30.1 | 16.09 |
| CDX73304 | Canola | nucleus | 29.77 | 15.78 |
| CDY12515 | Canola | plastid | 27.83 | 15.78 |
| CDY66161 | Canola | nucleus | 32.36 | 15.75 |
| CDY26922 | Canola | nucleus | 32.36 | 15.72 |
| CDX69392 | Canola | nucleus | 15.86 | 11.45 |
| CDX87118 | Canola | nucleus | 29.45 | 10.94 |
| CDX86969 | Canola | cytosol | 0.32 | 0.93 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078I039 | UniProt:A0A078I039 | EnsemblPlants:CDY42413 | ProteinID:CDY42413 |
| ProteinID:CDY42413.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00074713001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 | UniParc:UPI0004EE9A2F | SEG:seg | : | : |
Description
BnaA08g00010DBnaA08g00010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I039]
Coordinates
chrLK032523:-:276715..277911
Molecular Weight (calculated)
35738.0 Da
IEP (calculated)
5.665
GRAVY (calculated)
-0.788
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPMSLPPGF RFHPTDEELV AYYLDRKVNG RTIELEIIPE VDLYKCEPWD LPEKSFLPGN DMEWYFYSTR DKKYPNGSRT NRATRAGYWK ATGKDRVVES
101: KKMKMGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHPTSSS SIQESYALCR VFKKNIQIPK RKEEEMTTSV GKEEEEEEKK KWKKYDGETM ERESEEVESL
201: KIASAETSSS ELTQGILLDE ANSSSIFALH FSSSLLDDHD HQLFENYPQL PFHSPLPLQG FPQLSMNEAE IISMDNSKQQ DFHYRDSING TLDEIFSFAS
301: SSATLPPAL
101: KKMKMGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHPTSSS SIQESYALCR VFKKNIQIPK RKEEEMTTSV GKEEEEEEKK KWKKYDGETM ERESEEVESL
201: KIASAETSSS ELTQGILLDE ANSSSIFALH FSSSLLDDHD HQLFENYPQL PFHSPLPLQG FPQLSMNEAE IISMDNSKQQ DFHYRDSING TLDEIFSFAS
301: SSATLPPAL
001: MAPMSLPPGF RFHPTDEELV AYYLDRKVNG QAIELEIIPE VDLYKCEPWD LPEKSFLPGN DMEWYFYSTR DKKYPNGSRT NRATRAGYWK ATGKDRTVES
101: KKMKMGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHAPSSS LKESYALCRV FKKNIQIPKR KGEEEEAEEE STSVGKEEEE EKEKKWRKCD GNYIEDESLK
201: RASAETSSSE LTQGVLLDEA NSSSIFALHF SSSLLDDHDH LFSNYSHQLP YHPPLQLQDF PQLSMNEAEI MSIQQDFQCR DSMNGTLDEI FSSSATFPAS
301: L
101: KKMKMGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHAPSSS LKESYALCRV FKKNIQIPKR KGEEEEAEEE STSVGKEEEE EKEKKWRKCD GNYIEDESLK
201: RASAETSSSE LTQGVLLDEA NSSSIFALHF SSSLLDDHDH LFSNYSHQLP YHPPLQLQDF PQLSMNEAEI MSIQQDFQCR DSMNGTLDEI FSSSATFPAS
301: L
Arabidopsis Description
ANAC020NAC domain containing protein 20 [Source:UniProtKB/TrEMBL;Acc:Q67Z40]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.