Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28401 | Canola | cytosol, nucleus, plastid | 89.83 | 85.71 |
| CDX93723 | Canola | nucleus | 73.51 | 68.88 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 74.28 | 68.74 |
| CDY46459 | Canola | nucleus | 39.92 | 68.42 |
| CDX91785 | Canola | nucleus | 70.25 | 67.9 |
| AT1G34190.1 | Thale cress | nucleus | 69.48 | 64.99 |
| CDY28397 | Canola | nucleus | 65.26 | 58.82 |
| CDX73304 | Canola | nucleus | 64.49 | 57.63 |
| CDY70627 | Canola | cytosol | 16.7 | 52.73 |
| CDY41351 | Canola | plastid | 14.59 | 45.51 |
| CDY71253 | Canola | cytosol | 14.01 | 41.01 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 44.53 | 40.56 |
| CDX92153 | Canola | nucleus | 16.7 | 38.5 |
| CDX95832 | Canola | nucleus | 16.7 | 38.5 |
| Solyc12g056790.1.1 | Tomato | nucleus | 42.42 | 37.46 |
| PGSC0003DMT400043681 | Potato | nucleus | 42.03 | 37.37 |
| CDY25752 | Canola | nucleus | 36.47 | 37.33 |
| Solyc04g072220.2.1 | Tomato | cytosol, nucleus, plastid | 41.07 | 35.73 |
| CDY12515 | Canola | plastid | 36.66 | 35.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.97 | 31.11 |
| CDY10502 | Canola | nucleus | 18.04 | 30.62 |
| CDX81124 | Canola | nucleus | 19.96 | 30.41 |
| CDX77674 | Canola | nucleus | 16.51 | 30.28 |
| CDY42413 | Canola | nucleus | 17.85 | 30.1 |
| CDY44793 | Canola | nucleus | 20.15 | 30.0 |
| CDY63046 | Canola | nucleus | 16.7 | 30.0 |
| CDY43785 | Canola | nucleus | 19.77 | 29.94 |
| CDX67739 | Canola | nucleus | 17.85 | 29.9 |
| CDX84485 | Canola | nucleus | 19.77 | 29.77 |
| CDX90431 | Canola | nucleus | 16.31 | 29.72 |
| CDY01508 | Canola | nucleus | 16.31 | 29.72 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 33.21 | 29.47 |
| CDY44498 | Canola | nucleus | 16.51 | 29.45 |
| CDY59580 | Canola | nucleus | 16.51 | 29.25 |
| CDX78816 | Canola | nucleus | 16.31 | 29.11 |
| CDY66060 | Canola | nucleus | 15.93 | 29.02 |
| CDY67205 | Canola | nucleus | 15.93 | 29.02 |
| CDX87703 | Canola | nucleus | 16.31 | 28.91 |
| CDX84070 | Canola | nucleus | 15.55 | 28.62 |
| CDX86970 | Canola | nucleus | 16.51 | 27.22 |
| CDY00676 | Canola | nucleus | 21.31 | 25.93 |
| CDY41352 | Canola | nucleus | 20.92 | 25.89 |
| CDY00946 | Canola | nucleus | 21.69 | 25.06 |
| CDY41353 | Canola | nucleus | 21.11 | 24.94 |
| CDY00677 | Canola | nucleus | 21.11 | 24.72 |
| CDX88803 | Canola | cytosol | 15.93 | 24.63 |
| CDY08601 | Canola | nucleus, plastid | 21.5 | 24.62 |
| CDX70995 | Canola | cytosol | 15.74 | 24.55 |
| CDX73920 | Canola | nucleus | 20.92 | 24.38 |
| CDY04487 | Canola | cytosol | 16.12 | 24.35 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 16.12 | 24.35 |
| PGSC0003DMT400079995 | Potato | nucleus | 42.03 | 24.31 |
| CDX78356 | Canola | nucleus | 16.89 | 24.24 |
| Os09t0493700-01 | Rice | nucleus | 32.63 | 24.22 |
| CDX69911 | Canola | nucleus | 20.35 | 24.2 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 15.93 | 24.2 |
| CDY21575 | Canola | nucleus | 20.15 | 24.19 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 21.11 | 24.12 |
| CDY09128 | Canola | cytosol | 15.74 | 23.91 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 30.71 | 23.43 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 15.16 | 23.3 |
| KXG35937 | Sorghum | nucleus | 31.67 | 23.27 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 14.97 | 23.08 |
| CDX92368 | Canola | cytosol | 14.78 | 22.99 |
| CDY28745 | Canola | cytosol | 20.92 | 22.8 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 24.18 | 22.66 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 31.67 | 22.6 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 23.03 | 22.35 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 32.44 | 22.3 |
| CDY43143 | Canola | nucleus | 20.35 | 22.18 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 23.99 | 22.08 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 23.22 | 21.84 |
| CDY49932 | Canola | nucleus | 19.96 | 21.71 |
| CDY16943 | Canola | nucleus | 20.54 | 21.53 |
| CDX78734 | Canola | cytosol | 20.15 | 21.43 |
| CDX88115 | Canola | cytosol | 18.04 | 21.22 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 22.65 | 21.07 |
| CDY00208 | Canola | nucleus | 17.47 | 21.06 |
| CDX70745 | Canola | cytosol | 19.96 | 21.05 |
| CDY70628 | Canola | golgi | 15.93 | 20.96 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 20.73 | 20.81 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 20.54 | 20.74 |
| CDY05939 | Canola | nucleus | 18.43 | 20.73 |
| CDX80455 | Canola | nucleus | 17.85 | 20.39 |
| CDY19828 | Canola | nucleus | 17.27 | 20.22 |
| CDY08139 | Canola | nucleus | 17.47 | 19.61 |
| CDY60870 | Canola | nucleus | 21.11 | 19.06 |
| CDY34716 | Canola | nucleus | 10.36 | 18.37 |
| CDY16427 | Canola | nucleus | 20.92 | 18.32 |
| CDY26922 | Canola | nucleus | 21.11 | 17.3 |
| CDY21216 | Canola | nucleus | 14.2 | 17.21 |
| CDY66161 | Canola | nucleus | 20.73 | 17.01 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 18.81 | 16.7 |
| CDX87118 | Canola | nucleus | 17.47 | 10.94 |
| CDX69392 | Canola | nucleus | 8.45 | 10.28 |
| CDX86969 | Canola | cytosol | 1.15 | 5.61 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078C909 | EnsemblPlants:CDX73305 | ProteinID:CDX73305 | ProteinID:CDX73305.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00106396001 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF27 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EDC4D6 | SEG:seg |
Description
BnaC05g28010D
Coordinates
chrLK031798:+:1207133..1210328
Molecular Weight (calculated)
58546.4 Da
IEP (calculated)
4.771
GRAVY (calculated)
-0.621
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPCPNSCF KEGKFTAPGF RFHPTDEELV MYYLKRKMYR KRLTVNAIGV VDVYKIEPDD LPGQSVLKTG DRQWFYFTPR SRKYPNAARS GRGTATGFWK
101: AAGKDRVIVY NSRSVGLKKT LVFYRGRAPT GERTDWVMHE YTMNEEELDR CTNAKDYYAL YKLFKKSGSG PKNGEDYGAP FQEEEWVDDD SEDGDGDDIG
201: LPEEPLLDDF EDILNGFPRA PGVPQICING LPSSVSQVNR EEEMQSTLVK NSSGEFLKPQ QTGRFLPNGE PYIRPSSSGV EPFVFEIEDY IEMDDLLAPE
301: LAVERPAQFL NPGEFGDFNE FDQLFHDVSM SLDMEPIAQG ASVHPSSPSK FADNTSNEKQ QFQDQIPENK VNNNNLDDFT DDMWFQDDDD QAVRFDQPQS
401: ITNHNLLLPE HSRLYPHQEG GNGGGTSPFT SALRAFMDSI PSTPASACEG PINRTFVRMS SFSRIRYSKK ANGTPPVTST VAAKKRSRNR GFLLLSIVGA
501: LCAIFWVFIA TVRASGRPVL S
101: AAGKDRVIVY NSRSVGLKKT LVFYRGRAPT GERTDWVMHE YTMNEEELDR CTNAKDYYAL YKLFKKSGSG PKNGEDYGAP FQEEEWVDDD SEDGDGDDIG
201: LPEEPLLDDF EDILNGFPRA PGVPQICING LPSSVSQVNR EEEMQSTLVK NSSGEFLKPQ QTGRFLPNGE PYIRPSSSGV EPFVFEIEDY IEMDDLLAPE
301: LAVERPAQFL NPGEFGDFNE FDQLFHDVSM SLDMEPIAQG ASVHPSSPSK FADNTSNEKQ QFQDQIPENK VNNNNLDDFT DDMWFQDDDD QAVRFDQPQS
401: ITNHNLLLPE HSRLYPHQEG GNGGGTSPFT SALRAFMDSI PSTPASACEG PINRTFVRMS SFSRIRYSKK ANGTPPVTST VAAKKRSRNR GFLLLSIVGA
501: LCAIFWVFIA TVRASGRPVL S
001: MVDSSRDSCF KAGKFSAPGF RFHPTDEELV VYYLKRKICC KKLRVNAIGV VDVYKVDPSE LPGLSMLKTG DRQWFFFTPR NRKYPNAARS SRGTATGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP
201: DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL
301: NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN
401: QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ
501: TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV FKATVGVMGR PLLS
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP
201: DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL
301: NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN
401: QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ
501: TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV FKATVGVMGR PLLS
Arabidopsis Description
anac016NAC domain containing protein 16 [Source:TAIR;Acc:AT1G34180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.