Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034439.1-P | Field mustard | nucleus | 96.23 | 97.06 |
| CDY28397 | Canola | nucleus | 96.23 | 97.06 |
| AT1G34180.2 | Thale cress | nucleus | 71.7 | 72.57 |
| CDY46459 | Canola | nucleus | 37.74 | 72.37 |
| CDX91785 | Canola | nucleus | 64.32 | 69.57 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 65.69 | 68.03 |
| CDX93723 | Canola | nucleus | 64.32 | 67.45 |
| CDX73305 | Canola | nucleus | 57.63 | 64.49 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 60.21 | 64.29 |
| CDY70627 | Canola | cytosol | 14.58 | 51.52 |
| CDY41351 | Canola | plastid | 13.21 | 46.11 |
| CDY71253 | Canola | cytosol | 12.86 | 42.13 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 41.34 | 42.13 |
| CDY25752 | Canola | nucleus | 35.68 | 40.86 |
| CDX95832 | Canola | nucleus | 15.09 | 38.94 |
| CDY12515 | Canola | plastid | 36.02 | 38.53 |
| CDX92153 | Canola | nucleus | 14.92 | 38.5 |
| Solyc04g072220.2.1 | Tomato | cytosol, nucleus, plastid | 38.77 | 37.73 |
| Solyc12g056790.1.1 | Tomato | nucleus | 37.74 | 37.29 |
| PGSC0003DMT400043681 | Potato | nucleus | 36.88 | 36.69 |
| CDX77674 | Canola | nucleus | 16.12 | 33.1 |
| CDY63046 | Canola | nucleus | 16.3 | 32.76 |
| CDY01508 | Canola | nucleus | 15.95 | 32.52 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.73 | 32.51 |
| CDY59580 | Canola | nucleus | 16.3 | 32.31 |
| CDX90431 | Canola | nucleus | 15.78 | 32.17 |
| CDX87703 | Canola | nucleus | 16.12 | 31.97 |
| CDY44498 | Canola | nucleus | 15.95 | 31.85 |
| CDX78816 | Canola | nucleus | 15.78 | 31.51 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 31.39 | 31.18 |
| CDY66060 | Canola | nucleus | 15.09 | 30.77 |
| CDY67205 | Canola | nucleus | 15.09 | 30.77 |
| CDX67739 | Canola | nucleus | 16.3 | 30.55 |
| CDX84070 | Canola | nucleus | 14.75 | 30.39 |
| CDY10502 | Canola | nucleus | 15.95 | 30.29 |
| CDX81124 | Canola | nucleus | 17.67 | 30.12 |
| CDY42413 | Canola | nucleus | 15.78 | 29.77 |
| CDY44793 | Canola | nucleus | 17.84 | 29.71 |
| CDY43785 | Canola | nucleus | 17.5 | 29.65 |
| CDX84485 | Canola | nucleus | 17.5 | 29.48 |
| CDX86970 | Canola | nucleus | 14.58 | 26.9 |
| CDY41352 | Canola | nucleus | 18.52 | 25.65 |
| CDX88803 | Canola | cytosol | 14.75 | 25.52 |
| PGSC0003DMT400079995 | Potato | nucleus | 39.28 | 25.42 |
| CDX70995 | Canola | cytosol | 14.41 | 25.15 |
| Os09t0493700-01 | Rice | nucleus | 30.19 | 25.07 |
| CDY00676 | Canola | nucleus | 18.35 | 25.0 |
| CDY41353 | Canola | nucleus | 18.87 | 24.94 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 29.16 | 24.89 |
| CDY00677 | Canola | nucleus | 18.87 | 24.72 |
| CDY00946 | Canola | nucleus | 19.04 | 24.61 |
| CDX73920 | Canola | nucleus | 18.87 | 24.61 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 14.24 | 24.48 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 14.41 | 24.35 |
| CDX78356 | Canola | nucleus | 15.09 | 24.24 |
| CDY09128 | Canola | cytosol | 14.24 | 24.2 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 14.24 | 24.2 |
| CDY21575 | Canola | nucleus | 18.01 | 24.19 |
| CDX92368 | Canola | cytosol | 13.89 | 24.18 |
| CDY08601 | Canola | nucleus, plastid | 18.87 | 24.18 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 30.02 | 23.97 |
| CDX69911 | Canola | nucleus | 18.01 | 23.97 |
| CDY04487 | Canola | cytosol | 14.07 | 23.77 |
| KXG35937 | Sorghum | nucleus | 28.82 | 23.7 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 13.72 | 23.67 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 30.53 | 23.48 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 18.35 | 23.46 |
| CDY28745 | Canola | cytosol | 18.87 | 23.01 |
| CDY49932 | Canola | nucleus | 18.87 | 22.96 |
| CDY43143 | Canola | nucleus | 18.7 | 22.8 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 21.61 | 22.66 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 21.44 | 22.56 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 20.58 | 22.35 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 21.61 | 22.26 |
| CDY19828 | Canola | nucleus | 16.98 | 22.25 |
| CDY16943 | Canola | nucleus | 18.87 | 22.13 |
| CDX88115 | Canola | cytosol | 16.81 | 22.12 |
| CDX78734 | Canola | cytosol | 18.52 | 22.04 |
| CDY00208 | Canola | nucleus | 16.3 | 21.99 |
| CDX70745 | Canola | cytosol | 18.52 | 21.86 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 20.93 | 21.79 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 19.21 | 21.58 |
| CDX80455 | Canola | nucleus | 16.81 | 21.49 |
| CDY05939 | Canola | nucleus | 16.81 | 21.17 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 18.7 | 21.12 |
| CDY70628 | Canola | golgi | 14.24 | 20.96 |
| CDY08139 | Canola | nucleus | 16.3 | 20.47 |
| CDY34716 | Canola | nucleus | 9.95 | 19.73 |
| CDY21216 | Canola | nucleus | 13.89 | 18.84 |
| CDY60870 | Canola | nucleus | 18.52 | 18.72 |
| CDY16427 | Canola | nucleus | 18.35 | 17.98 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 17.84 | 17.72 |
| CDY26922 | Canola | nucleus | 18.87 | 17.3 |
| CDY66161 | Canola | nucleus | 18.52 | 17.01 |
| CDX87118 | Canola | nucleus | 17.15 | 12.02 |
| CDX69392 | Canola | nucleus | 8.06 | 10.98 |
| CDX86969 | Canola | cytosol | 1.72 | 9.35 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078CAS5 | EnsemblPlants:CDX73304 | ProteinID:CDX73304 | ProteinID:CDX73304.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00106395001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF27 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EF409D | SEG:seg | : |
Description
BnaC05g28020D
Coordinates
chrLK031798:+:1201879..1204515
Molecular Weight (calculated)
65478.1 Da
IEP (calculated)
4.581
GRAVY (calculated)
-0.564
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSCLKGGR FSAPGFRFHP TDEELVVYYL KRKICGRKLR INAIGVVDVY KVDPTELPGL SVLKSGDRQW FYFTPRNRKY PNAARSSRGT ATGYWKATGK
101: DRIIVYNSRS VGLKKTLVFY RGRAPNGERT DWVMHEYTMD EEELGRCKNA KEYYALYKLY KKSGAGPKNG EEYGAPFQEE EWVDDDDDDD DDDREDADNV
201: TVPDDHVVRY ENNPRVDDGV FCNPVDVRSD DFNKLLNEIP YAPGLAPRQM NDLSGVMQVN NEEEIQSTLL NNSSGEFLAP SEVGMFLPNY QPNSMHSSYQ
301: SHAANSFDAT EVKSAFNASG MAPFLFEKED YIEMDDLLTP EQGAASVEKP AQFLNPGEYE HFNDYDQLFH DVSMSFDLEP VFQGTSADLT SLSNFANDGR
401: QHFLYQQQFQ NQTLESQANI FMDPNPNVNQ FIDDMWFKDA QADLYDQTQS SSLAFASPSS GVMPESKNPV MSVNAQEQEC QNGSETRTQF SSAMWALLES
501: IPSTPASACE GPLNRTFVRM SSLSRIRFNA TSVTTSKVTA AKKGIGNRGF LLLSVVGALC AIFWVFIIAT VGVQGRHRDL NLS
101: DRIIVYNSRS VGLKKTLVFY RGRAPNGERT DWVMHEYTMD EEELGRCKNA KEYYALYKLY KKSGAGPKNG EEYGAPFQEE EWVDDDDDDD DDDREDADNV
201: TVPDDHVVRY ENNPRVDDGV FCNPVDVRSD DFNKLLNEIP YAPGLAPRQM NDLSGVMQVN NEEEIQSTLL NNSSGEFLAP SEVGMFLPNY QPNSMHSSYQ
301: SHAANSFDAT EVKSAFNASG MAPFLFEKED YIEMDDLLTP EQGAASVEKP AQFLNPGEYE HFNDYDQLFH DVSMSFDLEP VFQGTSADLT SLSNFANDGR
401: QHFLYQQQFQ NQTLESQANI FMDPNPNVNQ FIDDMWFKDA QADLYDQTQS SSLAFASPSS GVMPESKNPV MSVNAQEQEC QNGSETRTQF SSAMWALLES
501: IPSTPASACE GPLNRTFVRM SSLSRIRFNA TSVTTSKVTA AKKGIGNRGF LLLSVVGALC AIFWVFIIAT VGVQGRHRDL NLS
001: MVDSSRDSCF KAGKFSAPGF RFHPTDEELV VYYLKRKICC KKLRVNAIGV VDVYKVDPSE LPGLSMLKTG DRQWFFFTPR NRKYPNAARS SRGTATGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP
201: DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL
301: NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN
401: QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ
501: TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV FKATVGVMGR PLLS
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP
201: DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL
301: NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN
401: QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ
501: TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV FKATVGVMGR PLLS
Arabidopsis Description
anac016NAC domain containing protein 16 [Source:TAIR;Acc:AT1G34180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.