Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012626.1-P | Field mustard | nucleus | 99.3 | 99.3 |
| CDY01508 | Canola | nucleus | 95.8 | 95.8 |
| CDX78816 | Canola | nucleus | 86.71 | 84.93 |
| CDY44498 | Canola | nucleus | 86.01 | 84.25 |
| AT4G17980.2 | Thale cress | nucleus | 84.62 | 82.88 |
| CDX77674 | Canola | nucleus | 71.33 | 71.83 |
| CDY63046 | Canola | nucleus | 71.33 | 70.34 |
| CDY59580 | Canola | nucleus | 70.98 | 69.05 |
| CDX87703 | Canola | nucleus | 69.23 | 67.35 |
| CDY71253 | Canola | cytosol | 33.57 | 53.93 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 44.06 | 50.81 |
| PGSC0003DMT400045129 | Potato | nucleus | 58.74 | 50.45 |
| KRH58218 | Soybean | nucleus | 60.49 | 50.14 |
| CDY66060 | Canola | nucleus | 50.0 | 50.0 |
| CDY67205 | Canola | nucleus | 50.0 | 50.0 |
| KRH04320 | Soybean | nucleus | 59.79 | 50.0 |
| Solyc08g077110.2.1 | Tomato | nucleus | 59.09 | 49.71 |
| CDY70627 | Canola | cytosol | 28.67 | 49.7 |
| CDX84070 | Canola | nucleus | 48.6 | 49.12 |
| CDY41351 | Canola | plastid | 27.62 | 47.31 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 60.14 | 47.12 |
| CDX92153 | Canola | nucleus | 36.71 | 46.46 |
| CDX95832 | Canola | nucleus | 36.71 | 46.46 |
| Solyc06g061080.2.1 | Tomato | nucleus | 51.75 | 43.92 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 42.31 | 38.91 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 45.1 | 37.61 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 46.85 | 37.43 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 43.71 | 37.31 |
| CDY10502 | Canola | nucleus | 39.16 | 36.48 |
| EER94455 | Sorghum | nucleus | 44.76 | 36.26 |
| CDX67739 | Canola | nucleus | 39.16 | 36.01 |
| CDY42413 | Canola | nucleus | 38.81 | 35.92 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 45.45 | 34.76 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 43.36 | 34.73 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 43.36 | 33.97 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 43.36 | 33.79 |
| GSMUA_Achr11P... | Banana | nucleus | 43.36 | 31.31 |
| CDX86970 | Canola | nucleus | 32.52 | 29.43 |
| CDY46459 | Canola | nucleus | 29.37 | 27.63 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 31.12 | 25.95 |
| CDY09128 | Canola | cytosol | 30.77 | 25.66 |
| CDX88803 | Canola | cytosol | 30.07 | 25.52 |
| CDX70995 | Canola | cytosol | 29.72 | 25.45 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 29.72 | 25.15 |
| CDX92368 | Canola | cytosol | 29.37 | 25.07 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 29.72 | 25.07 |
| CDY43785 | Canola | nucleus | 30.07 | 25.0 |
| CDY44793 | Canola | nucleus | 30.42 | 24.86 |
| CDX84485 | Canola | nucleus | 30.07 | 24.86 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 29.72 | 24.64 |
| CDY04487 | Canola | cytosol | 29.72 | 24.64 |
| CDX81124 | Canola | nucleus | 29.02 | 24.27 |
| CDX70745 | Canola | cytosol | 40.21 | 23.28 |
| CDY43143 | Canola | nucleus | 38.81 | 23.22 |
| CDX78734 | Canola | cytosol | 39.51 | 23.06 |
| CDY28745 | Canola | cytosol | 38.46 | 23.01 |
| CDY49932 | Canola | nucleus | 38.11 | 22.76 |
| CDY16943 | Canola | nucleus | 39.16 | 22.54 |
| CDY00676 | Canola | nucleus | 32.52 | 21.73 |
| CDY41352 | Canola | nucleus | 31.82 | 21.62 |
| CDY00208 | Canola | nucleus | 32.17 | 21.3 |
| TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 30.07 | 21.03 |
| TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 30.07 | 21.03 |
| TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 30.07 | 21.03 |
| CDX88115 | Canola | cytosol | 32.52 | 20.99 |
| CDY60870 | Canola | nucleus | 42.31 | 20.97 |
| CDY16427 | Canola | nucleus | 42.66 | 20.5 |
| CDY41353 | Canola | nucleus | 31.47 | 20.41 |
| CDY00946 | Canola | nucleus | 32.17 | 20.4 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 32.52 | 20.39 |
| CDX69911 | Canola | nucleus | 31.12 | 20.32 |
| CDY21575 | Canola | nucleus | 30.77 | 20.28 |
| CDY08601 | Canola | nucleus, plastid | 32.17 | 20.22 |
| CDX80455 | Canola | nucleus | 32.17 | 20.18 |
| CDY05939 | Canola | nucleus | 32.52 | 20.09 |
| CDY08139 | Canola | nucleus | 32.52 | 20.04 |
| CDY19828 | Canola | nucleus | 31.12 | 20.0 |
| CDX73920 | Canola | nucleus | 31.12 | 19.91 |
| CDX78356 | Canola | nucleus | 25.17 | 19.83 |
| CDY00677 | Canola | nucleus | 30.77 | 19.78 |
| CDY34716 | Canola | nucleus | 19.58 | 19.05 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 33.92 | 18.69 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 33.57 | 18.6 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 34.27 | 17.63 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 33.92 | 17.51 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 34.62 | 17.49 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 33.57 | 17.14 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 32.17 | 17.13 |
| CDY25752 | Canola | nucleus | 30.42 | 17.09 |
| CDX93723 | Canola | nucleus | 33.22 | 17.09 |
| CDY21216 | Canola | nucleus | 25.17 | 16.74 |
| CDX91785 | Canola | nucleus | 30.77 | 16.33 |
| CDX73305 | Canola | nucleus | 29.72 | 16.31 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 31.82 | 16.16 |
| CDY70628 | Canola | golgi | 22.38 | 16.16 |
| CDY28397 | Canola | nucleus | 32.17 | 15.92 |
| CDX73304 | Canola | nucleus | 32.17 | 15.78 |
| CDY12515 | Canola | plastid | 30.07 | 15.78 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 29.02 | 15.2 |
| CDY66161 | Canola | nucleus | 31.82 | 14.33 |
| CDY26922 | Canola | nucleus | 31.82 | 14.31 |
| CDX87118 | Canola | nucleus | 32.17 | 11.06 |
| CDX69392 | Canola | nucleus | 13.99 | 9.35 |
| CDX86969 | Canola | cytosol | 0.7 | 1.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DME6 | EnsemblPlants:CDX90431 | ProteinID:CDX90431 | ProteinID:CDX90431.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00151041001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF51 | SUPFAM:SSF101941 | UniParc:UPI0004EEE858 | SEG:seg | : | : |
Description
BnaA03g43500D
Coordinates
chrLK031863:+:174068..175188
Molecular Weight (calculated)
32889.7 Da
IEP (calculated)
7.332
GRAVY (calculated)
-0.644
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MQMGSSCLPP GFRFHPTDEE LIGYYLSRKV EGLEIELEVI PVIDLYKFDP WELPDKSFLP NRDMEWFFFC PRDKKYPNGS RTNRATKAGY WKATGKDRKI
101: SCKSSGAIIG YRKTLVFYEG RAPLGDRTIW FMHEYRLCDD DLSQKSPNFK GAFVLCRVVK KNGLKTKTLK NKNEQAIGSG CSSLATSPCR DQTTQFQSFK
201: PSLTTNESSS IWISPDFILD SSKDYPQIQE GVSEYLPNYH FPVNGANHQM EIAETSYLNI DQSKQTGYWP NFEYDQTGSF DYSNLF
101: SCKSSGAIIG YRKTLVFYEG RAPLGDRTIW FMHEYRLCDD DLSQKSPNFK GAFVLCRVVK KNGLKTKTLK NKNEQAIGSG CSSLATSPCR DQTTQFQSFK
201: PSLTTNESSS IWISPDFILD SSKDYPQIQE GVSEYLPNYH FPVNGANHQM EIAETSYLNI DQSKQTGYWP NFEYDQTGSF DYSNLF
001: MGSSCLPPGF RFHPTDEELI GYYLSRKIEG LEIELEVIPV IDLYKFDPWE LPGKSFLPNR DLEWFFFCPR DKKYANGSRT NRATKAGYWK ATGKDRKITC
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
Arabidopsis Description
anac071NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.