Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytoskeleton 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 100.0 | 100.0 |
TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 100.0 | 100.0 |
GSMUA_Achr3P18070_001 | Banana | nucleus | 20.54 | 33.87 |
CDX78816 | Canola | nucleus | 21.76 | 30.48 |
CDY44498 | Canola | nucleus | 21.76 | 30.48 |
Bra013272.1-P | Field mustard | nucleus | 21.76 | 30.48 |
AT4G17980.2 | Thale cress | nucleus | 21.76 | 30.48 |
CDX77674 | Canola | nucleus | 21.03 | 30.28 |
CDX90431 | Canola | nucleus | 21.03 | 30.07 |
AT1G32510.1 | Thale cress | nucleus | 20.78 | 30.04 |
CDY63046 | Canola | nucleus | 21.27 | 30.0 |
CDY01508 | Canola | nucleus | 20.78 | 29.72 |
Bra012626.1-P | Field mustard | nucleus | 20.78 | 29.72 |
Bra025012.1-P | Field mustard | nucleus | 21.03 | 29.66 |
Bra022046.1-P | Field mustard | nucleus | 21.27 | 29.59 |
CDX87703 | Canola | nucleus | 21.27 | 29.59 |
CDY59580 | Canola | nucleus | 21.27 | 29.59 |
CDX84070 | Canola | nucleus | 20.05 | 28.98 |
Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 22.0 | 28.94 |
CDY67205 | Canola | nucleus | 20.05 | 28.67 |
Bra035488.1-P | Field mustard | nucleus | 20.05 | 28.67 |
CDY66060 | Canola | nucleus | 20.05 | 28.67 |
AT5G46590.1 | Thale cress | nucleus | 20.29 | 28.42 |
KRH04320 | Soybean | nucleus | 23.23 | 27.78 |
KRH58218 | Soybean | nucleus | 23.23 | 27.54 |
Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 22.98 | 27.41 |
VIT_02s0012g01040.t01 | Wine grape | nucleus | 24.45 | 27.4 |
PGSC0003DMT400045129 | Potato | nucleus | 22.0 | 27.03 |
Solyc08g077110.2.1 | Tomato | nucleus | 22.25 | 26.76 |
EER94455 | Sorghum | nucleus | 22.98 | 26.63 |
Solyc06g061080.2.1 | Tomato | nucleus | 21.52 | 26.11 |
HORVU1Hr1G049840.3 | Barley | cytosol | 22.74 | 26.05 |
TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 23.23 | 26.03 |
GSMUA_Achr5P03360_001 | Banana | nucleus | 21.76 | 24.86 |
GSMUA_Achr5P18140_001 | Banana | nucleus | 22.0 | 24.06 |
GSMUA_Achr11P... | Banana | nucleus | 22.98 | 23.74 |
TraesCSU01G137200.2 | Wheat | cytosol, nucleus, plastid | 21.76 | 21.92 |
TraesCSU01G135000.1 | Wheat | nucleus | 23.72 | 13.68 |
Protein Annotations
EnsemblPlants:TraesCSU01G215800.1 | EnsemblPlantsGene:TraesCSU01G215800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF14 |
PFAM:PF02365 | PFscan:PS51005 | SUPFAM:SSF101941 | MapMan:15.5.17 | : | : |
Description
No Description!
Coordinates
chrUn:-:319063615..319065236
Molecular Weight (calculated)
45358.3 Da
IEP (calculated)
5.860
GRAVY (calculated)
-0.467
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDIAPVQPL ALGLLQPEPG FRFHPTGQEL VTYDLLRKVH GHHAFIPEVH VYKHEPWELP GTSPTCPYLQ RRPGPIISSI DLIFINHACA DKSFSPSTHD
101: AGAKVEWYFF AVRARKYPNG LRMGRATVAG FWKSTGKDRP VMHNGVIVGM KKTLVFHTGR APGGTRTDWV MHEYRLQGQR NHHIQDAYAL CRVFKKNTVA
201: PLIDLSSDAD TYEDPMQSVP GGVDTDKDLM EHVSDGADSH KDPKHYVLGG IESDKYLIQS VLRGIGTHND PILVESDVAY AGKEQMESVL CGVGTDKDHI
301: HVESEFNSVH AGKGKKPFLA DRGSTSTGNM EFLAGGANKD NEGMQPVYAG ASADEENSVN AWYTAALAEE DNSWMQPPSY DDWYTRVDLD KDDSLMQFIF
401: GDVMLLSTD
101: AGAKVEWYFF AVRARKYPNG LRMGRATVAG FWKSTGKDRP VMHNGVIVGM KKTLVFHTGR APGGTRTDWV MHEYRLQGQR NHHIQDAYAL CRVFKKNTVA
201: PLIDLSSDAD TYEDPMQSVP GGVDTDKDLM EHVSDGADSH KDPKHYVLGG IESDKYLIQS VLRGIGTHND PILVESDVAY AGKEQMESVL CGVGTDKDHI
301: HVESEFNSVH AGKGKKPFLA DRGSTSTGNM EFLAGGANKD NEGMQPVYAG ASADEENSVN AWYTAALAEE DNSWMQPPSY DDWYTRVDLD KDDSLMQFIF
401: GDVMLLSTD
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.