Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022046.1-P | Field mustard | nucleus | 85.27 | 84.69 |
| CDY59580 | Canola | nucleus | 85.27 | 84.69 |
| CDX87703 | Canola | nucleus | 83.56 | 82.99 |
| CDX77674 | Canola | nucleus | 79.79 | 82.04 |
| Bra025012.1-P | Field mustard | nucleus | 80.82 | 81.38 |
| CDY63046 | Canola | nucleus | 80.82 | 81.38 |
| AT4G17980.2 | Thale cress | nucleus | 70.89 | 70.89 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 40.75 | 47.98 |
| KRH04320 | Soybean | nucleus | 55.82 | 47.66 |
| AT1G32510.1 | Thale cress | nucleus | 45.89 | 47.35 |
| KRH58218 | Soybean | nucleus | 55.48 | 46.96 |
| PGSC0003DMT400045129 | Potato | nucleus | 51.03 | 44.74 |
| AT3G17730.1 | Thale cress | nucleus | 37.67 | 44.72 |
| Solyc08g077110.2.1 | Tomato | nucleus | 51.03 | 43.82 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 53.42 | 42.74 |
| Solyc06g061080.2.1 | Tomato | nucleus | 47.26 | 40.95 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 39.04 | 36.66 |
| AT1G54330.1 | Thale cress | nucleus | 37.67 | 36.54 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 41.44 | 35.28 |
| EER94455 | Sorghum | nucleus | 41.78 | 34.56 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 42.12 | 34.36 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 39.38 | 34.33 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 42.81 | 33.42 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 39.04 | 31.93 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 39.38 | 31.34 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 39.04 | 31.23 |
| GSMUA_Achr11P... | Banana | nucleus | 40.07 | 29.55 |
| AT5G22290.1 | Thale cress | cytosol | 29.79 | 25.59 |
| AT3G44290.1 | Thale cress | cytosol | 28.08 | 24.48 |
| AT2G27300.1 | Thale cress | nucleus | 27.05 | 23.58 |
| AT5G17260.1 | Thale cress | nucleus | 35.96 | 22.06 |
| AT3G03200.1 | Thale cress | nucleus | 35.96 | 21.92 |
| AT5G64060.1 | Thale cress | nucleus | 26.71 | 21.91 |
| AT3G10490.2 | Thale cress | nucleus | 32.19 | 20.84 |
| TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 28.42 | 20.29 |
| TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 28.42 | 20.29 |
| TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 28.42 | 20.29 |
| AT5G24590.2 | Thale cress | nucleus | 30.82 | 19.96 |
| AT3G49530.1 | Thale cress | nucleus | 30.48 | 18.98 |
| AT1G65910.1 | Thale cress | nucleus | 39.04 | 18.07 |
| AT3G10480.3 | Thale cress | plastid | 32.19 | 17.87 |
| AT3G10500.1 | Thale cress | cytosol, nucleus, vacuole | 32.88 | 17.49 |
| AT4G35580.2 | Thale cress | nucleus | 31.85 | 17.42 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 32.88 | 16.93 |
| AT1G34190.1 | Thale cress | nucleus | 30.82 | 16.16 |
| AT5G09330.5 | Thale cress | nucleus | 26.71 | 15.95 |
| AT1G34180.2 | Thale cress | nucleus | 31.16 | 15.8 |
| AT1G32870.3 | Thale cress | nucleus | 30.48 | 15.78 |
| AT1G33060.2 | Thale cress | nucleus | 32.88 | 14.72 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:834702 | EMBL:AB493778 | ProteinID:AED95401.1 | ArrayExpress:AT5G46590 |
| EnsemblPlantsGene:AT5G46590 | RefSeq:AT5G46590 | TAIR:AT5G46590 | RefSeq:AT5G46590-TAIR-G | EnsemblPlants:AT5G46590.1 | TAIR:AT5G46590.1 |
| ProteinID:BAA97530.1 | EMBL:BT020305 | EMBL:BT020555 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009789 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_199471.1 | PFAM:PF02365 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF51 |
| UniProt:Q9LS24 | SUPFAM:SSF101941 | UniParc:UPI00000AA55E | Symbol:anac096 | : | : |
Description
anac096NAC domain-containing protein 96 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS24]
Coordinates
chr5:+:18905258..18907052
Molecular Weight (calculated)
33582.2 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.673
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSCLPPGF RFHPTDEELI EYYLKRKVEG LEIELEVIPV IDLYSFDPWE LPDKSFLPNR DMEWYFFCSR DKKYPNGFRT NRGTKAGYWK ATGKDRKITS
101: RSSSIIGYRK TLVFYKGRAP LGDRSNWIMH EYRLCDDDTS QGSQNLKGAF VLCRVAMKNE IKTNTKIRKI PSEQTIGSGE SSGLSSRVTS PSRDETMPFH
201: SFANPVSTET DSSNIWISPE FILDSSKDYP QIQDVASQCF QQDFDFPIIG NQNMEFPAST SLDQNMDEFM QNGYWTNYGY DQTGLFGYSD FS
101: RSSSIIGYRK TLVFYKGRAP LGDRSNWIMH EYRLCDDDTS QGSQNLKGAF VLCRVAMKNE IKTNTKIRKI PSEQTIGSGE SSGLSSRVTS PSRDETMPFH
201: SFANPVSTET DSSNIWISPE FILDSSKDYP QIQDVASQCF QQDFDFPIIG NQNMEFPAST SLDQNMDEFM QNGYWTNYGY DQTGLFGYSD FS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.