Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025012.1-P | Field mustard | nucleus | 98.94 | 96.9 |
| CDY63046 | Canola | nucleus | 98.94 | 96.9 |
| CDY59580 | Canola | nucleus | 89.44 | 86.39 |
| CDX87703 | Canola | nucleus | 87.68 | 84.69 |
| AT5G46590.1 | Thale cress | nucleus | 82.04 | 79.79 |
| CDX90431 | Canola | nucleus | 71.83 | 71.33 |
| CDY44498 | Canola | nucleus | 72.89 | 70.89 |
| CDY01508 | Canola | nucleus | 71.13 | 70.63 |
| CDX78816 | Canola | nucleus | 71.83 | 69.86 |
| CDY71253 | Canola | cytosol | 32.75 | 52.25 |
| CDY70627 | Canola | cytosol | 29.93 | 51.52 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 44.01 | 50.4 |
| CDY66060 | Canola | nucleus | 49.65 | 49.3 |
| CDY67205 | Canola | nucleus | 49.65 | 49.3 |
| CDX84070 | Canola | nucleus | 48.94 | 49.12 |
| KRH04320 | Soybean | nucleus | 58.8 | 48.83 |
| KRH58218 | Soybean | nucleus | 58.45 | 48.12 |
| CDY41351 | Canola | plastid | 28.17 | 47.9 |
| PGSC0003DMT400045129 | Potato | nucleus | 54.58 | 46.55 |
| CDX92153 | Canola | nucleus | 36.62 | 46.02 |
| CDX95832 | Canola | nucleus | 36.62 | 46.02 |
| Solyc08g077110.2.1 | Tomato | nucleus | 53.52 | 44.71 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 56.69 | 44.11 |
| Solyc06g061080.2.1 | Tomato | nucleus | 50.35 | 42.43 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 42.61 | 38.91 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 42.61 | 36.12 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 43.31 | 35.86 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 45.07 | 35.75 |
| EER94455 | Sorghum | nucleus | 44.37 | 35.69 |
| CDY10502 | Canola | nucleus | 38.03 | 35.18 |
| CDX67739 | Canola | nucleus | 38.38 | 35.05 |
| CDY42413 | Canola | nucleus | 37.68 | 34.63 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 44.37 | 33.69 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 42.25 | 33.61 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 42.61 | 32.97 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 42.25 | 32.88 |
| GSMUA_Achr11P... | Banana | nucleus | 43.66 | 31.31 |
| CDY46459 | Canola | nucleus | 30.63 | 28.62 |
| CDX86970 | Canola | nucleus | 31.34 | 28.16 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 30.99 | 26.04 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 31.34 | 25.95 |
| CDY09128 | Canola | cytosol | 30.99 | 25.66 |
| CDY43785 | Canola | nucleus | 30.99 | 25.58 |
| CDX88803 | Canola | cytosol | 30.28 | 25.52 |
| CDX70995 | Canola | cytosol | 29.93 | 25.45 |
| CDX84485 | Canola | nucleus | 30.99 | 25.43 |
| CDX92368 | Canola | cytosol | 29.93 | 25.37 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 30.28 | 25.37 |
| CDY44793 | Canola | nucleus | 30.28 | 24.57 |
| CDX81124 | Canola | nucleus | 28.87 | 23.98 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 28.52 | 23.48 |
| CDY04487 | Canola | cytosol | 28.52 | 23.48 |
| CDY43143 | Canola | nucleus | 38.38 | 22.8 |
| CDY28745 | Canola | cytosol | 38.03 | 22.59 |
| CDY49932 | Canola | nucleus | 37.68 | 22.34 |
| CDX78734 | Canola | cytosol | 38.03 | 22.04 |
| CDX70745 | Canola | cytosol | 38.03 | 21.86 |
| CDY41352 | Canola | nucleus | 32.39 | 21.85 |
| CDY16943 | Canola | nucleus | 37.68 | 21.53 |
| CDY00946 | Canola | nucleus | 34.15 | 21.51 |
| CDY08601 | Canola | nucleus, plastid | 34.15 | 21.32 |
| CDY41353 | Canola | nucleus | 33.1 | 21.32 |
| CDY00676 | Canola | nucleus | 32.04 | 21.26 |
| TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 30.28 | 21.03 |
| TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 30.28 | 21.03 |
| TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 30.28 | 21.03 |
| CDX88115 | Canola | cytosol | 32.39 | 20.77 |
| CDY60870 | Canola | nucleus | 41.9 | 20.62 |
| CDY00208 | Canola | nucleus | 30.99 | 20.37 |
| CDX73920 | Canola | nucleus | 32.04 | 20.36 |
| CDY00677 | Canola | nucleus | 31.69 | 20.22 |
| CDY16427 | Canola | nucleus | 42.25 | 20.17 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 32.04 | 19.96 |
| CDX80455 | Canola | nucleus | 32.04 | 19.96 |
| CDX69911 | Canola | nucleus | 29.93 | 19.41 |
| CDY34716 | Canola | nucleus | 20.07 | 19.39 |
| CDY21575 | Canola | nucleus | 29.58 | 19.35 |
| CDY19828 | Canola | nucleus | 30.28 | 19.33 |
| CDX78356 | Canola | nucleus | 24.65 | 19.28 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 35.21 | 19.27 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 34.86 | 19.19 |
| CDY05939 | Canola | nucleus | 30.99 | 19.01 |
| CDY08139 | Canola | nucleus | 30.63 | 18.75 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 36.62 | 18.7 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 36.27 | 18.59 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 36.97 | 18.55 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 35.92 | 18.21 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 33.1 | 17.5 |
| CDY25752 | Canola | nucleus | 30.63 | 17.09 |
| CDX93723 | Canola | nucleus | 33.45 | 17.09 |
| CDX91785 | Canola | nucleus | 31.69 | 16.7 |
| CDY70628 | Canola | golgi | 23.24 | 16.67 |
| CDX73305 | Canola | nucleus | 30.28 | 16.51 |
| CDY28397 | Canola | nucleus | 33.45 | 16.44 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 32.39 | 16.34 |
| CDX73304 | Canola | nucleus | 33.1 | 16.12 |
| CDY21216 | Canola | nucleus | 23.94 | 15.81 |
| CDY12515 | Canola | plastid | 30.28 | 15.78 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 29.93 | 15.57 |
| CDY66161 | Canola | nucleus | 32.75 | 14.65 |
| CDY26922 | Canola | nucleus | 32.39 | 14.47 |
| CDX87118 | Canola | nucleus | 30.63 | 10.46 |
| CDX69392 | Canola | nucleus | 12.68 | 8.41 |
| CDX86969 | Canola | cytosol | 0.7 | 1.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078CNT9 | EnsemblPlants:CDX77674 | ProteinID:CDX77674 | ProteinID:CDX77674.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00128635001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF51 | SUPFAM:SSF101941 | UniParc:UPI0004EE0B69 | : | : | : |
Description
BnaC07g19280D
Coordinates
chrLK031812:+:731150..732520
Molecular Weight (calculated)
32564.7 Da
IEP (calculated)
5.220
GRAVY (calculated)
-0.709
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSLPPGF RFHPTDEELI DYYLKRKVEG LEIELEVIPV IDLYKFDPWE LPDKSFLPNR DMEWFFFCSR DKKYPNGLRT NRGTKAGYWK ATGKDRKITC
101: RSSSTVGYRK TLVFYKGRAP LGDRTSWLMH EYRLCDDESS SQGSQYFKGA FVLCRVAKKN ENKSNSKIQR NLSEQTLGSG ESSGYSSRVT SPSRDGTVPF
201: HSFVNPDSSN IWISPDFILD SSKDYPQIQD VAPYFQDFDF PVFGNQDVDV PASTLNANVD QSIDESMQTG YWTNSWYDQT GLFD
101: RSSSTVGYRK TLVFYKGRAP LGDRTSWLMH EYRLCDDESS SQGSQYFKGA FVLCRVAKKN ENKSNSKIQR NLSEQTLGSG ESSGYSSRVT SPSRDGTVPF
201: HSFVNPDSSN IWISPDFILD SSKDYPQIQD VAPYFQDFDF PVFGNQDVDV PASTLNANVD QSIDESMQTG YWTNSWYDQT GLFD
001: MGSSCLPPGF RFHPTDEELI EYYLKRKVEG LEIELEVIPV IDLYSFDPWE LPDKSFLPNR DMEWYFFCSR DKKYPNGFRT NRGTKAGYWK ATGKDRKITS
101: RSSSIIGYRK TLVFYKGRAP LGDRSNWIMH EYRLCDDDTS QGSQNLKGAF VLCRVAMKNE IKTNTKIRKI PSEQTIGSGE SSGLSSRVTS PSRDETMPFH
201: SFANPVSTET DSSNIWISPE FILDSSKDYP QIQDVASQCF QQDFDFPIIG NQNMEFPAST SLDQNMDEFM QNGYWTNYGY DQTGLFGYSD FS
101: RSSSIIGYRK TLVFYKGRAP LGDRSNWIMH EYRLCDDDTS QGSQNLKGAF VLCRVAMKNE IKTNTKIRKI PSEQTIGSGE SSGLSSRVTS PSRDETMPFH
201: SFANPVSTET DSSNIWISPE FILDSSKDYP QIQDVASQCF QQDFDFPIIG NQNMEFPAST SLDQNMDEFM QNGYWTNYGY DQTGLFGYSD FS
Arabidopsis Description
anac096NAC domain-containing protein 96 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS24]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.