Factsheet for GSMUA_Achr11P17780_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P18070_001	Banana	nucleus	34.34	54.84
GSMUA_Achr5P18140_001	Banana	nucleus	44.95	47.59
Solyc08g077110.2.1	Tomato	nucleus	38.89	45.29
Solyc06g061080.2.1	Tomato	nucleus	38.38	45.1
GSMUA_Achr5P03360_001	Banana	nucleus	40.66	44.97
VIT_02s0012g01040.t01	Wine grape	nucleus	41.41	44.93
PGSC0003DMT400045129	Potato	nucleus	37.63	44.74
KRH04320	Soybean	nucleus	38.38	44.44
KRH58218	Soybean	nucleus	38.64	44.35
Zm00001d047050_P001	Maize	cytosol, nucleus, plastid	34.34	43.73
CDX77674	Canola	nucleus	31.31	43.66
EER94455	Sorghum	nucleus	38.89	43.63
Zm00001d030023_P001	Maize	cytosol, nucleus, plastid	37.63	43.44
CDX90431	Canola	nucleus	31.31	43.36
CDX84070	Canola	nucleus	30.81	43.11
CDY63046	Canola	nucleus	31.57	43.1
Bra035488.1-P	Field mustard	nucleus	31.06	43.01
Bra012626.1-P	Field mustard	nucleus	31.06	43.01
CDY01508	Canola	nucleus	31.06	43.01
Bra025012.1-P	Field mustard	nucleus	31.31	42.76
AT1G32510.1	Thale cress	nucleus	30.56	42.76
TraesCS1A01G190100.1	Wheat	nucleus	36.11	42.69
CDY67205	Canola	nucleus	30.81	42.66
CDY66060	Canola	nucleus	30.81	42.66
GSMUA_Achr3P13880_001	Banana	cytosol	25.51	42.08
AT4G17980.2	Thale cress	nucleus	30.81	41.78
Bra013272.1-P	Field mustard	nucleus	30.81	41.78
CDX78816	Canola	nucleus	30.81	41.78
CDY44498	Canola	nucleus	30.56	41.44
CDY59580	Canola	nucleus	30.3	40.82
Bra022046.1-P	Field mustard	nucleus	30.3	40.82
GSMUA_Achr11P...	Banana	cytosol	19.44	40.74
TraesCS1B01G192200.1	Wheat	cytosol, nucleus, plastid	37.37	40.55
CDX87703	Canola	nucleus	29.8	40.14
AT5G46590.1	Thale cress	nucleus	29.55	40.07
GSMUA_Achr9P23940_001	Banana	cytosol	24.24	39.83
TraesCS1D01G194200.2	Wheat	cytosol, nucleus, plastid	36.87	39.78
HORVU1Hr1G049840.3	Barley	cytosol	34.85	38.66
GSMUA_Achr6P03200_001	Banana	cytosol	20.2	37.56
GSMUA_Achr10P...	Banana	nucleus	22.47	34.63
GSMUA_Achr1P02820_001	Banana	nucleus	29.29	31.18
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	20.96	28.62
GSMUA_AchrUn_...	Banana	nucleus	25.51	28.45
GSMUA_Achr11P...	Banana	nucleus	27.02	27.94
TraesCSU01G215800.1	Wheat	cytoskeleton, nucleus, peroxisome	23.74	22.98
TraesCSU01G168500.1	Wheat	cytoskeleton, nucleus, peroxisome	23.74	22.98
TraesCSU01G163300.1	Wheat	cytoskeleton, nucleus, peroxisome	23.74	22.98
GSMUA_Achr7P23330_001	Banana	nucleus	23.23	22.55
GSMUA_Achr11P...	Banana	nucleus	23.48	21.23
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	28.54	20.32
GSMUA_Achr8P13430_001	Banana	nucleus	30.56	19.93
GSMUA_AchrUn_...	Banana	nucleus	25.25	17.57
GSMUA_Achr5P23620_001	Banana	nucleus	22.73	16.89
GSMUA_AchrUn_...	Banana	nucleus	19.95	16.53
GSMUA_Achr1P03560_001	Banana	nucleus	23.48	16.2
GSMUA_Achr8P24280_001	Banana	nucleus	23.23	15.67
GSMUA_Achr4P29170_001	Banana	nucleus	22.47	15.48
GSMUA_Achr9P23580_001	Banana	plastid	22.47	15.01
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	20.2	13.33
GSMUA_Achr2P04010_001	Banana	plastid	20.2	12.48
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	22.47	11.73

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G17780_001
EnsemblPlants:GSMUA_Achr11P17780_001	EnsemblPlants:GSMUA_Achr11T17780_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0RT58	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF51	SUPFAM:SSF101941
UniParc:UPI000294C662	SEG:seg	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G17780_001]

Coordinates

chr11:+:19346368..19348571

Molecular Weight (calculated)

44053.8 Da

IEP (calculated)

6.193

GRAVY (calculated)

-0.459

Length

396 amino acids

Sequence
(BLAST)

001: MTTSSLLPGF RFRPTDDELV GYYLKRKVDG LGTELDLIPV VQLYKYDPWD LPGNAARKEK DIELISTSVP WLFMHVSLYK SFLPKRDMEW FFFCPRDRKY
101: PNGLRTNRAT ASGYWKATGK DRKIACEPSV FALRKTLVFY RGRAPGGERM DWVMNEYRLC ENLHEGSSNF VGGFALCRVI KRNVHGMKTG DLHGESKAKR
201: CPSSSDAFKF DPKGYSGKVL NSLEENSSRV TKVSHRSTDS TPIASPDADR EIDSEMRGFW ESQVVSDASK TSLVDRGISS SMITIGNTAE REASPPSNLS
301: PFSVDLIEEE FGVVGGFPGS GSLLAFPSPA YCMGLYGNAR DITYQSLELD APRDPSASHS GTETWNTTAP ASVCRQAGEG EDESLWLHED NLVVVI

Best Arabidopsis Sequence Match ( AT4G17980.2 )
(BLAST)

001: MGSSCLPPGF RFHPTDEELI GYYLSRKIEG LEIELEVIPV IDLYKFDPWE LPGKSFLPNR DLEWFFFCPR DKKYANGSRT NRATKAGYWK ATGKDRKITC
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF

Arabidopsis Description

anac071NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.