Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol, nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr2P09220_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G49530.1 | GSMUA_Achr2P09220_001 | AT5G19570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 35.17 | 53.97 |
| VIT_15s0048g02310.t01 | Wine grape | cytosol | 27.59 | 48.48 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 28.28 | 38.5 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 31.72 | 38.33 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 31.03 | 37.34 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 69.31 | 34.96 |
| GSMUA_Achr10P... | Banana | nucleus | 29.31 | 33.07 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 28.28 | 33.06 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 64.83 | 32.75 |
| VIT_15s0048g02290.t01 | Wine grape | nucleus | 31.38 | 28.35 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.07 | 26.2 |
| GSMUA_Achr11P... | Banana | nucleus | 33.79 | 25.59 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 30.34 | 24.58 |
| CDY05939 | Canola | nucleus | 38.28 | 23.97 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 30.69 | 23.92 |
| CDY08139 | Canola | nucleus | 37.93 | 23.71 |
| CDY00208 | Canola | nucleus | 34.83 | 23.38 |
| Bra019599.1-P | Field mustard | nucleus | 34.83 | 23.38 |
| Bra017980.1-P | Field mustard | nucleus | 37.24 | 23.33 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 29.66 | 22.99 |
| CDX88115 | Canola | cytosol | 34.83 | 22.8 |
| CDX80455 | Canola | nucleus | 35.52 | 22.59 |
| Bra009774.1-P | Field mustard | nucleus | 35.17 | 22.42 |
| VIT_15s0048g02320.t01 | Wine grape | nucleus | 27.24 | 22.38 |
| AT5G24590.2 | Thale cress | nucleus | 34.48 | 22.17 |
| AT4G35580.2 | Thale cress | nucleus | 40.69 | 22.1 |
| CDY19828 | Canola | nucleus | 33.79 | 22.02 |
| Bra036520.1-P | Field mustard | nucleus | 33.79 | 22.02 |
| AT3G49530.1 | Thale cress | nucleus | 34.83 | 21.54 |
| VIT_02s0025g03020.t01 | Wine grape | nucleus | 45.86 | 21.04 |
| GSMUA_Achr11P... | Banana | nucleus | 28.62 | 20.96 |
| GSMUA_Achr11P... | Banana | nucleus | 30.0 | 19.86 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 27.59 | 19.61 |
| VIT_16s0098g00760.t01 | Wine grape | mitochondrion | 43.1 | 19.41 |
| VIT_15s0048g02300.t01 | Wine grape | nucleus | 29.31 | 19.36 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 50.34 | 19.24 |
| KRH72602 | Soybean | nucleus | 38.97 | 19.19 |
| KRH16970 | Soybean | nucleus | 38.97 | 19.15 |
| KRH64275 | Soybean | nucleus | 38.97 | 18.74 |
| VIT_15s0048g02280.t01 | Wine grape | golgi, nucleus, plasma membrane | 32.41 | 18.4 |
| KRH53649 | Soybean | nucleus | 37.93 | 18.39 |
| CDY66161 | Canola | nucleus | 40.0 | 18.27 |
| Bra010193.1-P | Field mustard | nucleus | 40.0 | 18.24 |
| CDY26922 | Canola | nucleus | 40.0 | 18.24 |
| AT1G33060.2 | Thale cress | nucleus | 40.0 | 17.79 |
| PGSC0003DMT400001498 | Potato | nucleus | 37.93 | 17.24 |
| Solyc06g073050.2.1 | Tomato | nucleus | 34.83 | 16.97 |
| VIT_15s0048g02270.t01 | Wine grape | nucleus | 35.17 | 16.24 |
| PGSC0003DMT400069511 | Potato | nucleus | 34.83 | 16.03 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 30.69 | 16.01 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 29.31 | 15.95 |
| Solyc03g080090.2.1 | Tomato | nucleus | 34.48 | 15.9 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 32.76 | 15.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.69 | 15.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.52 | 15.48 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 31.03 | 15.33 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 28.62 | 14.0 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 26.55 | 12.83 |
| CDX87118 | Canola | nucleus | 34.14 | 11.9 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 26.21 | 11.86 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr2G11810_001 |
| EnsemblPlants:GSMUA_Achr2P11810_001 | EnsemblPlants:GSMUA_Achr2T11810_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0S772 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF102 | SUPFAM:SSF101941 |
| UniParc:UPI00029530D0 | : | : | : | : | : |
Description
Putative NAC domain-containing protein 74 [Source:GMGC_GENE;Acc:GSMUA_Achr2G11810_001]
Coordinates
chr2:+:14467724..14471639
Molecular Weight (calculated)
32333.4 Da
IEP (calculated)
6.786
GRAVY (calculated)
-0.486
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVLSAKSLP LGFRFRPTDV ELVNHYLKGK ISGRIKSEVE VIPEIDVCKY EPCDLPDKSL TKSVDSEWFF FAPKDKKYPN SNRSNRATEA GYWKPTGKDR
101: MIKSGSACPA IIGMKKTLVF HLGRAPKGVR TNWIMHEYRT LESESVSGEQ GGFVLCRLFR KPEEKTPIFD NDDFTQRNVD EMESSGLFAP ATPSPGETLH
201: GVEATEEVVT PLNQKNLGSD LQEILQPLPL KTNVQPSGVN GLAADKTDIT RSYPLKPEES HCNDTIVSDA ANHGTVLGSE VRNRQIFVFF
101: MIKSGSACPA IIGMKKTLVF HLGRAPKGVR TNWIMHEYRT LESESVSGEQ GGFVLCRLFR KPEEKTPIFD NDDFTQRNVD EMESSGLFAP ATPSPGETLH
201: GVEATEEVVT PLNQKNLGSD LQEILQPLPL KTNVQPSGVN GLAADKTDIT RSYPLKPEES HCNDTIVSDA ANHGTVLGSE VRNRQIFVFF
001: MGAVSMESLP LGFRFRPTDE ELVNHYLRLK INGRHSDVRV IPDIDVCKWE PWDLPALSVI KTDDPEWFFF CPRDRKYPNG HRSNRATDSG YWKATGKDRS
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN
501: GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN
501: GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV
Arabidopsis Description
NTL9NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.