Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr2P09220_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G49530.1 | GSMUA_Achr2P09220_001 | AT5G19570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 16.21 | 65.08 |
| VIT_15s0048g02310.t01 | Wine grape | cytosol | 11.46 | 52.73 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 19.24 | 50.34 |
| Zm00001d049540_P002 | Maize | cytosol | 37.81 | 43.42 |
| OQU79937 | Sorghum | nucleus | 37.29 | 42.62 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 13.44 | 42.5 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 13.18 | 41.49 |
| Os08t0157900-01 | Rice | nucleus, plasma membrane | 39.0 | 40.6 |
| Zm00001d024543_P001 | Maize | nucleus | 35.31 | 40.36 |
| TraesCS7D01G295100.1 | Wheat | nucleus | 35.7 | 38.99 |
| HORVU7Hr1G070780.5 | Barley | nucleus | 36.1 | 38.92 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 35.57 | 38.52 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 10.8 | 38.5 |
| TraesCS7B01G187600.1 | Wheat | nucleus | 35.44 | 38.37 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 26.75 | 35.3 |
| GSMUA_Achr10P... | Banana | nucleus | 11.86 | 35.02 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 11.2 | 34.27 |
| VIT_15s0048g02290.t01 | Wine grape | nucleus | 13.83 | 32.71 |
| AT4G35580.2 | Thale cress | nucleus | 22.92 | 32.58 |
| VIT_02s0025g03020.t01 | Wine grape | nucleus | 26.75 | 32.12 |
| CDY00208 | Canola | nucleus | 17.79 | 31.25 |
| Bra019599.1-P | Field mustard | nucleus | 17.79 | 31.25 |
| CDX88115 | Canola | cytosol | 18.18 | 31.15 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 23.32 | 30.84 |
| CDX80455 | Canola | nucleus | 18.31 | 30.48 |
| Bra009774.1-P | Field mustard | nucleus | 18.18 | 30.33 |
| VIT_15s0048g02320.t01 | Wine grape | nucleus | 14.1 | 30.31 |
| AT5G24590.2 | Thale cress | nucleus | 17.92 | 30.16 |
| Bra036520.1-P | Field mustard | nucleus | 17.65 | 30.11 |
| CDY19828 | Canola | nucleus | 17.65 | 30.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.97 | 29.86 |
| AT3G49530.1 | Thale cress | nucleus | 18.45 | 29.85 |
| CDY08139 | Canola | nucleus | 18.18 | 29.74 |
| Bra017980.1-P | Field mustard | nucleus | 18.05 | 29.59 |
| CDY05939 | Canola | nucleus | 18.05 | 29.59 |
| GSMUA_Achr11P... | Banana | nucleus | 14.89 | 29.5 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 14.36 | 29.3 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 13.18 | 27.93 |
| KRH16970 | Soybean | nucleus | 21.61 | 27.8 |
| KRH72602 | Soybean | nucleus | 21.48 | 27.67 |
| VIT_16s0098g00760.t01 | Wine grape | mitochondrion | 22.92 | 27.02 |
| KRH53649 | Soybean | nucleus | 20.95 | 26.59 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 12.91 | 26.2 |
| PGSC0003DMT400001498 | Potato | nucleus | 21.74 | 25.86 |
| VIT_15s0048g02300.t01 | Wine grape | nucleus | 14.76 | 25.51 |
| KRH64275 | Soybean | nucleus | 20.16 | 25.37 |
| Solyc03g080090.2.1 | Tomato | nucleus | 20.82 | 25.12 |
| AT1G33060.2 | Thale cress | nucleus | 21.48 | 25.0 |
| CDY66161 | Canola | nucleus | 20.42 | 24.41 |
| Bra010193.1-P | Field mustard | nucleus | 20.42 | 24.37 |
| CDY26922 | Canola | nucleus | 20.42 | 24.37 |
| Solyc06g073050.2.1 | Tomato | nucleus | 19.1 | 24.37 |
| PGSC0003DMT400069511 | Potato | nucleus | 20.03 | 24.13 |
| VIT_15s0048g02270.t01 | Wine grape | nucleus | 19.5 | 23.57 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 12.12 | 22.55 |
| GSMUA_Achr11P... | Banana | nucleus | 11.73 | 22.47 |
| VIT_15s0048g02280.t01 | Wine grape | golgi, nucleus, plasma membrane | 14.76 | 21.92 |
| GSMUA_Achr11P... | Banana | nucleus | 12.38 | 21.46 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 15.55 | 21.22 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 16.6 | 20.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.02 | 20.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 11.59 | 18.41 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 13.97 | 18.06 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 13.97 | 17.88 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 11.86 | 16.89 |
| CDX87118 | Canola | nucleus | 18.18 | 16.59 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 13.44 | 15.91 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 12.52 | 15.83 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSMUA_AchrUn_randomG04060_001 | EnsemblPlants:GSMUA_AchrUn_randomP04060_001 | EnsemblPlants:GSMUA_AchrUn_randomT04060_001 | InterPro:IPR003441 | InterPro:IPR036093 |
| UniProt:M0U668 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF102 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI000294F044 | SEG:seg | : |
Description
no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04060_001]
Coordinates
chrchrUn_random:+:17835239..17839440
Molecular Weight (calculated)
83836.0 Da
IEP (calculated)
4.563
GRAVY (calculated)
-0.544
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPFTLCIGG VSAIFSIHVT PPHHTAFFFP APLIILSIDA MTLIALDSLP LGFRFQPTDE ELVNYYLKPK ITGRIRSQME VIPEIDVCKC EPWDLPDKSV
101: IKSDDPEWFF FAPKDRKYPN GHRSNRATEA GYWKATGKDR IIRSKSSAGK STIIGMKKTL VFHRGRAPKG ARTHWIMHEY RTTEPEFESG DQGGYVIYRL
201: FRKLEQRIST SKADEMETNG FSPSPIKSSP GDTQHEADVM DDTETLLNDS PKSDLKEEPK SSSDSVHKQP AGIKRRMVDK VDCSTDVSVK PGRSYCKLDS
301: PDEEIEVGEK ADPLQDALAK FFDPGNEQID RDVFPNISSI ELPDTNYTCM GNENQEFQIG SLPVDNGDED LLNEFLISAL NPDNLSSGAS IFSKDSVAGN
401: LLKPSLWDSA SCKDSGTSSD IETEPGLPQG GAGLEASEWF CGSSLLPTDS SLLPTQLSTL YENATLLPYD ITGTDMYSID SGADSLQDLF NGMWELNNQK
501: TVSDSKDDSE GTGIKIVSHQ MQPVQPNSDN FFVQGTAARR IRLQSSILKV PFAEPLSRSN DEDEASTTNA KGDILGTMEE ATSKKNTMRN RDGPVETGLK
601: IRDQQSPNEL FAQQGETSIN DTWCYELPSG FDHEPSISSD YGIRSGRTEV EEHVGDNISE GEESAVPALP DKLDQSSILD TDEKPSGSSE HQMPDSVLRL
701: RTKSTSDSEN MHKHSPPSCP KASRGHSVIV YMMYLVLSVV LLLLCFGIRR CMSPLSVQL
101: IKSDDPEWFF FAPKDRKYPN GHRSNRATEA GYWKATGKDR IIRSKSSAGK STIIGMKKTL VFHRGRAPKG ARTHWIMHEY RTTEPEFESG DQGGYVIYRL
201: FRKLEQRIST SKADEMETNG FSPSPIKSSP GDTQHEADVM DDTETLLNDS PKSDLKEEPK SSSDSVHKQP AGIKRRMVDK VDCSTDVSVK PGRSYCKLDS
301: PDEEIEVGEK ADPLQDALAK FFDPGNEQID RDVFPNISSI ELPDTNYTCM GNENQEFQIG SLPVDNGDED LLNEFLISAL NPDNLSSGAS IFSKDSVAGN
401: LLKPSLWDSA SCKDSGTSSD IETEPGLPQG GAGLEASEWF CGSSLLPTDS SLLPTQLSTL YENATLLPYD ITGTDMYSID SGADSLQDLF NGMWELNNQK
501: TVSDSKDDSE GTGIKIVSHQ MQPVQPNSDN FFVQGTAARR IRLQSSILKV PFAEPLSRSN DEDEASTTNA KGDILGTMEE ATSKKNTMRN RDGPVETGLK
601: IRDQQSPNEL FAQQGETSIN DTWCYELPSG FDHEPSISSD YGIRSGRTEV EEHVGDNISE GEESAVPALP DKLDQSSILD TDEKPSGSSE HQMPDSVLRL
701: RTKSTSDSEN MHKHSPPSCP KASRGHSVIV YMMYLVLSVV LLLLCFGIRR CMSPLSVQL
001: MGAVSMESLP LGFRFRPTDE ELVNHYLRLK INGRHSDVRV IPDIDVCKWE PWDLPALSVI KTDDPEWFFF CPRDRKYPNG HRSNRATDSG YWKATGKDRS
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN
501: GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN
501: GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV
Arabidopsis Description
NTL9NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.