Factsheet for GSMUA_Achr5P23620_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P03200_001	Banana	cytosol	30.77	77.0
GSMUA_Achr11P...	Banana	cytosol	15.01	42.33
GSMUA_Achr3P13880_001	Banana	cytosol	18.39	40.83
GSMUA_Achr9P23940_001	Banana	cytosol	18.2	40.25
Os01t0261200-01	Rice	cytosol	35.46	38.65
HORVU3Hr1G036380.1	Barley	cytosol	34.52	38.17
TraesCS3B01G208300.2	Wheat	cytosol	34.33	38.05
TraesCS3D01G183900.2	Wheat	cytosol	35.08	37.4
TraesCS3A01G176500.1	Wheat	cytosol	34.9	37.2
GSMUA_Achr10P...	Banana	nucleus	17.45	36.19
Zm00001d040318_P001	Maize	cytosol, endoplasmic reticulum, nucleus	34.9	35.98
KXG32209	Sorghum	endoplasmic reticulum, nucleus, peroxisome	34.33	35.33
GSMUA_Achr3P18070_001	Banana	nucleus	15.76	33.87
Zm00001d008308_P002	Maize	plastid	24.77	30.7
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	15.95	29.31
GSMUA_AchrUn_...	Banana	nucleus	18.76	28.17
GSMUA_Achr1P02820_001	Banana	nucleus	19.14	27.42
GSMUA_Achr5P03360_001	Banana	nucleus	18.2	27.09
GSMUA_Achr11P...	Banana	nucleus	18.76	26.11
GSMUA_Achr7P23330_001	Banana	nucleus	18.57	24.26
GSMUA_Achr5P18140_001	Banana	nucleus	16.89	24.06
GSMUA_Achr11P...	Banana	nucleus	18.95	23.06
GSMUA_Achr11P...	Banana	nucleus	16.89	22.73
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	21.01	20.14
GSMUA_Achr8P13430_001	Banana	nucleus	22.33	19.6
GSMUA_Achr1P03560_001	Banana	nucleus	18.39	17.07
GSMUA_AchrUn_...	Banana	nucleus	18.01	16.87
GSMUA_Achr4P29170_001	Banana	nucleus	17.64	16.35
GSMUA_AchrUn_...	Banana	nucleus	14.63	16.32
GSMUA_Achr8P24280_001	Banana	nucleus	17.26	15.67
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	17.64	15.67
GSMUA_Achr9P23580_001	Banana	plastid	17.07	15.35
GSMUA_Achr2P04010_001	Banana	plastid	16.89	14.04
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	16.89	11.86

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr5G23620_001	EnsemblPlants:GSMUA_Achr5P23620_001	EnsemblPlants:GSMUA_Achr5T23620_001	InterPro:IPR003441	InterPro:IPR036093
UniProt:M0T137	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF17	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0002962FFD	SEG:seg	:

Description

Putative NAC domain-containing protein 74 [Source:GMGC_GENE;Acc:GSMUA_Achr5G23620_001]

Coordinates

chr5:+:25306234..25310235

Molecular Weight (calculated)

59750.7 Da

IEP (calculated)

7.043

GRAVY (calculated)

-0.403

Length

533 amino acids

Sequence
(BLAST)

001: MDKLSASLPP GFGFHPTDVE LISHYLKRKI LGHKFDELIP ELDIYKHEPW DLPAKCRLPT RDSKWHFFNL RDRKYPNGSR SNRATEEGYW KSTGRDRNVK
101: FQNRVIGTKK TLVFHEGRPP RGKHTDWIMH EYYIDEKECK AAPGLKDAFV LCRVTKRNGW QVEIEKIEPM GCKESSHSGE IDDINAWVAE LFDPDFGAPV
201: NDFNTPSTDF GTSSNMLEHE AEISQTDLRS LLPKQEPVDH YLDQSAEGDL DYLLEGDIYN ILQSDSVLWE SNGTIDTAFT TESSSPDGNA GKENFTSFGH
301: NDTGIQIRPR RAGPAAELTS KKIRLQVSKM ESRGSASVNH TVKIDKEDRH LDLKKSHNTD FSAFDQESAV GKLSVCFHRA DAKSNPSSGS NLPCSVASRS
401: LLGARPATDV TLQKSTGALD DASCIRGILR SLGMAVRALP SAGWNCFILS GCIIGIAALL ICLLLRDARG FLASFSSLWF NWVLAWTSRI YITSLRSECL
501: LLHICHLCNI SNVIHSESSI TYLRSCKQHL IFL

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.