Factsheet for GSMUA_Achr8P13430_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018364	Potato	mitochondrion, nucleus	14.83	77.59
GSMUA_Achr11P...	Banana	nucleus	45.14	71.54
GSMUA_Achr1P02820_001	Banana	nucleus	36.24	59.14
GSMUA_Achr3P13880_001	Banana	cytosol	22.57	57.08
GSMUA_Achr9P23940_001	Banana	cytosol	22.08	55.6
GSMUA_AchrUn_...	Banana	nucleus	32.29	55.21
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	44.48	48.56
Os03t0119966-01	Rice	nucleus	50.74	47.38
GSMUA_Achr11P...	Banana	cytosol	14.66	47.09
GSMUA_Achr6P03200_001	Banana	cytosol	16.31	46.48
EER95621	Sorghum	nucleus	50.91	45.31
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	51.07	44.86
GSMUA_Achr10P...	Banana	nucleus	18.95	44.75
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	50.74	44.7
Zm00001d048493_P004	Maize	nucleus	50.41	44.54
Zm00001d027395_P009	Maize	nucleus	48.6	44.43
TraesCS5A01G519300.1	Wheat	cytosol, nucleus, peroxisome	50.74	44.38
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	50.74	44.13
PGSC0003DMT400055322	Potato	nucleus	39.54	42.7
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	46.95	42.66
Solyc02g036430.1.1	Tomato	nucleus	39.37	42.3
KRH17271	Soybean	cytosol, nucleus, plasma membrane	43.16	40.68
GSMUA_Achr3P18070_001	Banana	nucleus	16.47	40.32
KRH30885	Soybean	cytosol, nucleus, vacuole	44.15	39.88
KRH72917	Soybean	cytosol, nucleus, plasma membrane	42.01	39.66
KRG98003	Soybean	cytosol, nucleus, plasma membrane	43.82	39.23
CDX70745	Canola	cytosol	31.63	38.87
Bra021366.1-P	Field mustard	nucleus	30.64	38.75
CDY49932	Canola	nucleus	30.48	38.62
AT5G17260.1	Thale cress	nucleus	30.15	38.45
CDY16943	Canola	nucleus	31.3	38.23
Bra039745.1-P	Field mustard	nucleus	34.27	38.1
AT3G03200.1	Thale cress	nucleus	29.98	38.0
Bra032009.1-P	Field mustard	nucleus	29.65	37.66
Bra006392.1-P	Field mustard	cytosol	30.31	37.55
CDX78734	Canola	cytosol	30.31	37.55
CDY28745	Canola	cytosol	29.49	37.45
CDY43143	Canola	nucleus	29.49	37.45
CDY60870	Canola	nucleus	34.1	35.88
AT1G65910.1	Thale cress	nucleus	37.23	35.82
CDY16427	Canola	nucleus	34.43	35.13
Bra008567.1-P	Field mustard	nucleus	24.88	33.78
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	15.65	32.76
GSMUA_Achr5P03360_001	Banana	nucleus	19.28	32.68
CDY21216	Canola	nucleus	23.06	32.56
GSMUA_Achr5P18140_001	Banana	nucleus	19.77	32.09
GSMUA_Achr11P...	Banana	nucleus	19.93	30.56
GSMUA_Achr7P23330_001	Banana	nucleus	19.28	28.68
GSMUA_Achr11P...	Banana	nucleus	19.6	27.17
GSMUA_AchrUn_...	Banana	nucleus	21.25	22.67
GSMUA_Achr5P23620_001	Banana	nucleus	19.6	22.33
GSMUA_Achr1P03560_001	Banana	nucleus	20.76	21.95
Solyc02g081270.2.1	Tomato	nucleus	36.24	21.38
GSMUA_AchrUn_...	Banana	nucleus	16.31	20.71
GSMUA_Achr4P29170_001	Banana	nucleus	19.44	20.52
GSMUA_Achr8P24280_001	Banana	nucleus	19.6	20.27
GSMUA_Achr9P23580_001	Banana	plastid	18.95	19.39
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	17.79	18.0
GSMUA_Achr2P04010_001	Banana	plastid	18.45	17.47
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	20.76	16.6

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr8G13430_001	EnsemblPlants:GSMUA_Achr8P13430_001	EnsemblPlants:GSMUA_Achr8T13430_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TQ46
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF6
SUPFAM:SSF101941	UniParc:UPI0002968078	SEG:seg	:	:	:

Description

no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G13430_001]

Coordinates

chr8:-:10176651..10179567

Molecular Weight (calculated)

68312.2 Da

IEP (calculated)

5.482

GRAVY (calculated)

-0.661

Length

607 amino acids

Sequence
(BLAST)

001: MASMSLPPGF RFHPTDEELV VYYLKRKING RELELEIIPE VDLYKCEPWD LPEKSFLPGK DLEWYFFSPR DRKYPNGSRT NRATQAGYWK ATGKDRRVSS
101: QRRAVGTKKT LVYYRGRAPH GSRTDWVMHE YRLDEKECEN AAAGLQDAYA LCRVFKKTAP GPQIVVDHSQ WMSTDRSPTV DLSSDGRGDE FESREMMQGA
201: SLDGSACEDG KWMQYLTEEA FGGGVPCHDP GSFTYMPSKV DVALECARLQ HRLSLPPLEV EDFPRMDLTQ SKAMRSGSFQ EGSNQVDILQ EILSVASASN
301: ELIDDSSYAD MWVGTTNPHL DEFASFLEPT KLIEISDLEE ELKEEEKKKV ENLRGIVVES EERSVRLGSI PTYQFGEAVG IEGEADGRTR SNGVDDDDTK
401: PIFPESGPDD LAVGFLGVHH RHGGDEGRAD HEYEKVEFQR GLFVSHAGMI ETFFHRIEPS KKVSFHLSPV ARGDMAAETH GDAARSRGRF PFFGRVKAFI
501: QDKLIRNEAC QGNGRASEVV EIAALVLSSR TNRSDEAKGQ VMEQEREGGC TTWKKKEENK KSRRGGDCES NVWFPDMRAG RGICRMFLLG KLPFLLSSAL
601: PPHGFRS

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.