CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72917	Soybean	cytosol, nucleus, plasma membrane	91.93	92.07
PGSC0003DMT400018364	Potato	mitochondrion, nucleus	14.6	81.03
KRG98003	Soybean	cytosol, nucleus, plasma membrane	72.67	69.03
KRH30885	Soybean	cytosol, nucleus, vacuole	71.58	68.6
KRH34662	Soybean	cytosol	9.01	63.74
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	63.66	61.38
GSMUA_Achr1P02820_001	Banana	nucleus	32.14	55.65
GSMUA_Achr11P...	Banana	nucleus	33.07	55.61
PGSC0003DMT400055322	Potato	nucleus	46.74	53.56
Solyc02g036430.1.1	Tomato	nucleus	46.58	53.1
KRH09473	Soybean	nucleus	20.65	50.38
KRH38928	Soybean	nucleus	20.5	49.81
GSMUA_AchrUn_...	Banana	nucleus	27.33	49.58
KRH13792	Soybean	nucleus	25.93	48.13
KRH43662	Soybean	nucleus	25.62	47.41
Bra039745.1-P	Field mustard	nucleus	39.91	47.07
AT5G17260.1	Thale cress	nucleus	32.92	44.54
CDY60870	Canola	nucleus	39.6	44.19
AT1G65910.1	Thale cress	nucleus	43.17	44.06
CDY43143	Canola	nucleus	32.45	43.72
CDY28745	Canola	cytosol	32.14	43.31
Bra032009.1-P	Field mustard	nucleus	32.14	43.31
CDY16427	Canola	nucleus	39.91	43.19
GSMUA_Achr8P13430_001	Banana	nucleus	40.68	43.16
AT3G03200.1	Thale cress	nucleus	31.68	42.59
Bra021366.1-P	Field mustard	nucleus	31.68	42.5
CDY49932	Canola	nucleus	31.52	42.38
CDX70745	Canola	cytosol	32.45	42.31
CDY16943	Canola	nucleus	32.3	41.85
CDX78734	Canola	cytosol	31.83	41.84
Bra006392.1-P	Field mustard	cytosol	31.83	41.84
Os03t0119966-01	Rice	nucleus	41.61	41.23
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	44.1	41.1
KRH04320	Soybean	nucleus	21.74	40.94
EER95621	Sorghum	nucleus	43.32	40.91
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	44.1	40.69
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	35.09	40.65
TraesCS5A01G519300.1	Wheat	cytosol, nucleus, peroxisome	43.79	40.63
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	43.01	40.2
Zm00001d048493_P004	Maize	nucleus	42.86	40.17
KRH58218	Soybean	nucleus	21.43	40.0
Zm00001d027395_P009	Maize	nucleus	40.99	39.76
Bra008567.1-P	Field mustard	nucleus	27.33	39.37
CDY21216	Canola	nucleus	24.69	36.98
KRH43549	Soybean	cytosol	15.84	31.58
Solyc02g081270.2.1	Tomato	nucleus	45.81	28.67
KRH59567	Soybean	cytosol, golgi, nucleus	13.98	28.39
KRH22653	Soybean	nucleus	15.22	26.42
KRG92124	Soybean	nucleus	18.32	25.38
KRH34660	Soybean	plastid	18.32	25.38
KRH72602	Soybean	nucleus	21.89	23.94
KRG91745	Soybean	nucleus	20.34	23.86
KRH16970	Soybean	nucleus	21.74	23.73
KRH64275	Soybean	nucleus	21.89	23.38
KRH35027	Soybean	nucleus	20.19	23.21
KRH53649	Soybean	nucleus	21.43	23.08
KRH64046	Soybean	nucleus	17.24	22.98
KRH53893	Soybean	nucleus	17.39	22.27
KRG92121	Soybean	cytosol	20.34	21.69
KRH26664	Soybean	nucleus	15.06	19.68

Protein Annotations

EntrezGene:100809019	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:ACUP02009073	ncoils:Coil	EnsemblPlantsGene:GLYMA_14G210000
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	UniProt:I1MBR0
InterPro:IPR003441	InterPro:IPR036093	EnsemblPlants:KRH17271	ProteinID:KRH17271	ProteinID:KRH17271.1	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF6	SUPFAM:SSF101941
TMHMM:TMhelix	UniParc:UPI000233AFAB	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:47524327..47529700

Molecular Weight (calculated)

73444.7 Da

IEP (calculated)

4.844

GRAVY (calculated)

-0.515

Length

644 amino acids

Sequence
(BLAST)

001: MAPVLPPGFR FHPTDEELVA YYLKRKINGR KIELEIIPEV DLYKCEPWDL PGKSLLPGKD LEWYFFSPRD RKYPNGSRTN RATKSGYWKA TGKDRKVNSQ
101: ARAVGMKKTL VYYRGRAPHG SRTNWVMHEY RLDERECETN SGLQDAYALC RVVKKTAVIP PKVGGHYVNV PNANKITSDQ SSSIELYSEG RHEDLDSSNY
201: LMSMDICSPC NMGNDQTSLT INSGMTRDLE KWSHFSSQDP LFSLPTSSSF SNFGAIAYPP SKVDIALECA RMQHRFVMPP LEVDDFPQVG VSELKMAQAS
301: GSMQGSCRTE TDILQEILSV AQVSQELINQ SSYSQDWGGN DNYAPREDDF TFMVGTNYNH SNEMSSMRYV DKTWEDAINT RTIEIGDVDE EFKEERMVEN
401: LRWVGMSSED LEKMQEQKIV PIEDISSFQT NREENEVQES EQQNNKEHND TEINDFSLGF INDDDPNKNF IEDGNMDDYS SSPSFEVVEE IKVNHGMLVS
501: TRQVVETFFH QIVPSQTVQV HLINSVMAHN HYVENAEAML MIMENQGSLL RNKVKAYVMG KLIKPSKTIA SAIVFIFAFV LMHCVYLKEE VEIWNESNNE
601: VWFVGVKSHD EKGLSAILKK IGIFLTISLA LCTMWANQNM IVNP

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.