CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35027	Soybean	nucleus	93.44	91.61
KRH34662	Soybean	cytosol	9.84	59.34
VIT_18s0001g01820.t01	Wine grape	nucleus	49.54	47.55
Solyc04g072220.2.1	Tomato	cytosol, nucleus, plastid	48.45	44.41
PGSC0003DMT400043681	Potato	nucleus	44.99	42.15
Solyc12g056790.1.1	Tomato	nucleus	44.08	41.02
KRH09473	Soybean	nucleus	18.58	38.64
KRH38928	Soybean	nucleus	18.58	38.49
Bra012342.1-P	Field mustard	nucleus	34.79	37.52
CDY25752	Canola	nucleus	34.79	37.52
CDY12515	Canola	plastid	34.79	35.05
GSMUA_AchrUn_...	Banana	nucleus	36.25	34.97
AT1G32870.3	Thale cress	nucleus	35.34	34.4
GSMUA_Achr8P24280_001	Banana	nucleus	36.25	33.9
KRH13792	Soybean	nucleus	19.85	31.41
KRH43549	Soybean	cytosol	18.4	31.27
KRH04320	Soybean	nucleus	19.31	30.99
KRH43662	Soybean	nucleus	19.49	30.75
KRH58218	Soybean	nucleus	19.13	30.43
PGSC0003DMT400079995	Potato	nucleus	48.82	29.74
KRH59567	Soybean	cytosol, golgi, nucleus	16.76	29.02
KRG92124	Soybean	nucleus	22.4	26.45
KRH34660	Soybean	plastid	22.4	26.45
KXG35937	Sorghum	nucleus	32.79	25.39
Os09t0493700-01	Rice	nucleus	32.24	25.21
TraesCS5D01G279100.2	Wheat	nucleus, peroxisome, plastid	30.6	24.6
KRH22653	Soybean	nucleus	16.58	24.53
TraesCS5A01G271500.2	Wheat	nucleus	32.24	24.25
KRH64046	Soybean	nucleus	21.13	24.02
HORVU5Hr1G074230.30	Barley	nucleus, plastid	32.42	23.48
KRH53893	Soybean	nucleus	20.77	22.66
KRH53649	Soybean	nucleus	22.22	20.4
KRH72602	Soybean	nucleus	21.86	20.37
KRH17271	Soybean	cytosol, nucleus, plasma membrane	23.86	20.34
KRH72917	Soybean	cytosol, nucleus, plasma membrane	23.68	20.22
KRH64275	Soybean	nucleus	22.04	20.07
KRH16970	Soybean	nucleus	21.49	20.0
KRG92121	Soybean	cytosol	20.95	19.04
KRH26664	Soybean	nucleus	16.76	18.66
KRG98003	Soybean	cytosol, nucleus, plasma membrane	22.59	18.29
KRH30885	Soybean	cytosol, nucleus, vacuole	22.22	18.15
TraesCS5B01G271800.1	Wheat	cytosol, golgi, peroxisome	18.58	17.38

Protein Annotations

EntrezGene:100787232	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:ACUP02012706	EnsemblPlantsGene:GLYMA_20G172100	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	UniProt:I1NH70	InterPro:IPR003441
InterPro:IPR036093	ProteinID:KRG91744.1	EnsemblPlants:KRG91745	ProteinID:KRG91745	ProteinID:KRG91745.1	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF27	SUPFAM:SSF101941
TMHMM:TMhelix	UniParc:UPI000233D9A7	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:40979473..40983793

Molecular Weight (calculated)

61697.8 Da

IEP (calculated)

4.505

GRAVY (calculated)

-0.489

Length

549 amino acids

Sequence
(BLAST)

001: MGEASGAGSA DCFSQMMSSM PGFRFHPTDE ELVMYYLKRK ICGKRLKLDV IHETDVYKWD PEDLPGQSIL KTGDRQWFFF CHRDRKYPNG GRSNRATRRG
101: YWKATGKDRN VICNSRSVGV KKTLVFYAGR APSGERTDWV MHEYTLDEEE LKRCQGVKDY YALYKVYKKS GPGPKNGEQY GAPFNEEEWA DDDIVDFNIN
201: SADQEAPNDV ADNVNVPLPF LDDEINNIIR EILDDELVLD QQHVNGYPDF PQVVSEETQS TVVDQFSEDV MLPEPVRISH PSCQFFDAQP SFDFNRPVTS
301: HLHVSETSEV TSASNIKTKE LDFNEDGFLE INDLIDTEPT LSNVENSVEY QHFEDGLSEL DLFQDAQMFL RDLGPIIHET DSHAYTNALV SSNIECQSYQ
401: LLPNPEDANQ TVGEFWMHGE SNQLSSPGVV YESVGFPTEG NNNQSSTVED VATSSLSSAL WAFVESIPTT PASAAESALV NRALNRMSSF SRLKIKHTNI
501: AASGKDTGTM KRAGRKGLPF LFFSILIALC AFCWVFVGNL RLVGRSISP

Best Arabidopsis Sequence Match ( AT1G34190.1 )
(BLAST)

001: MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD

Arabidopsis Description

NAC017NAC017 [Source:UniProtKB/TrEMBL;Acc:A0A178WNW4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.