Factsheet for Os09t0493700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G279100.2	Wheat	nucleus, peroxisome, plastid	60.83	62.52
TraesCS5A01G271500.2	Wheat	nucleus	62.68	60.27
KXG35937	Sorghum	nucleus	59.97	59.38
HORVU5Hr1G074230.30	Barley	nucleus, plastid	62.25	57.65
TraesCS5B01G271800.1	Wheat	cytosol, golgi, peroxisome	47.15	56.39
CDY46459	Canola	nucleus	18.23	42.11
GSMUA_AchrUn_...	Banana	nucleus	28.49	35.15
GSMUA_Achr8P24280_001	Banana	nucleus	28.35	33.9
AT1G34190.1	Thale cress	nucleus	25.93	32.67
CDX73305	Canola	nucleus	24.22	32.63
Bra036744.1-P	Field mustard	nucleus	25.21	32.36
CDX91785	Canola	nucleus	24.79	32.28
KRG91745	Soybean	nucleus	25.21	32.24
Bra028039.1-P	Field mustard	nucleus	25.5	32.19
VIT_18s0001g01820.t01	Wine grape	nucleus	26.21	32.17
KRH35027	Soybean	nucleus	25.5	31.96
PGSC0003DMT400043681	Potato	nucleus	26.5	31.74
CDX93723	Canola	nucleus	25.07	31.65
CDY28401	Canola	cytosol, nucleus, plastid	24.5	31.5
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	24.36	31.32
CDY48632	Canola	cytosol, nucleus, plastid	25.07	31.26
Solyc04g072220.2.1	Tomato	cytosol, nucleus, plastid	26.35	30.88
Solyc12g056790.1.1	Tomato	nucleus	25.78	30.68
CDY28397	Canola	nucleus	25.21	30.62
Bra034439.1-P	Field mustard	nucleus	25.21	30.62
CDX73304	Canola	nucleus	25.07	30.19
AT1G34180.2	Thale cress	nucleus	24.64	30.03
CDY25752	Canola	nucleus	21.23	29.27
Bra012342.1-P	Field mustard	nucleus	21.23	29.27
CDY12515	Canola	plastid	21.23	27.34
AT1G32870.3	Thale cress	nucleus	21.51	26.77
Os09t0552800-00	Rice	nucleus	12.82	24.59
Os05t0426200-02	Rice	nucleus	15.38	24.05
PGSC0003DMT400079995	Potato	nucleus	27.64	21.53
Os01t0261200-01	Rice	cytosol	13.53	19.43
Os08t0562200-02	Rice	nucleus	17.81	19.05
Os02t0822400-01	Rice	nucleus	16.67	18.51
Os03t0119966-01	Rice	nucleus	16.38	17.69
Os08t0157900-01	Rice	nucleus, plasma membrane	16.38	15.78

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4347449	EMBL:AK068501	EMBL:AK099237	ProteinID:BAF25461.1
ProteinID:BAT08767.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os09g0493700
EnsemblPlants:Os09t0493700-01	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF106	UniProt:Q0J0L8
SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0000DD97B6	RefSeq:XP_015611740.1	SEG:seg	:

Description

NAC DOMAIN-CONTAINING PROTEIN 42Similar to CUC2. (Os09t0493700-01)

Coordinates

chr9:-:19121959..19125032

Molecular Weight (calculated)

77269.5 Da

IEP (calculated)

4.615

GRAVY (calculated)

-0.504

Length

702 amino acids

Sequence
(BLAST)

001: MGMENPPLRW PPGFRFSPTD EELVLYFLKR RIATGRPTPY IADVDVYKSH PSHLPERSAL RTGDKQWFFF SRMDRKYPNG SRASRTTGEG YWKATGKDRS
101: ICNGGGGGTA SGRAVGSKKT LVYHHGRAPR GERSDWVMHE YTLLADALPP AARDREAYAL YKLFHKSGAG PKNGEQYGAP FREEDWLDDD DHHHDQLPAE
201: AALPAPATTS GRAATTEEHA DFELPGGDLD VLLAQIENDQ DIIEAQLDFS THVTSQVQIQ HRVHQGWLSD DGGKSDVADA TTSGSALLMA ENTCAELPID
301: GLEQLLMQIS DDQQTVEMLS GFSASVPQSQ LQHDYHQGCL GVHREEVGVA DSTTVSSAVV TEECTVRELQ DIEGLLMQIE NDQENAESLP DFSTPVHLHD
401: CHQAAFGDFQ GSQRATFNIA NLSTMVQESP NFDLQTGPSN QITESILTTE PMNGETNAVE ETSPLRSMSV LGSYDRQDGD DEFLEINDFF DPEDLEQILG
501: STRSQNLIPA DDGVFDSLQY SDAPMFLPGS FDRTGVVAEN HYVEFGASGI QNQGFQHTTE LLAHNQVALN VRNHMKDNHV VFSHSSDATI IHTVNEQPPN
601: RSSNASQSWF NGALSALLDS VPSSPAMAAE NIGLNRTLQR ISSFRSQQPA REEVSSTLIN TRRRGGGLIF ISLMVLLVAI MWTFSNGSAV KLSKGLWKFP
701: ST

Best Arabidopsis Sequence Match ( AT1G34190.1 )
(BLAST)

001: MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD

Arabidopsis Description

NAC017NAC017 [Source:UniProtKB/TrEMBL;Acc:A0A178WNW4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.