Factsheet for Os08t0157900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os05t0188300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49530.1	Os05t0188300-01	AT5G19570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	17.83	68.78
Zm00001d049540_P002	Maize	cytosol	58.02	63.99
TraesCS7A01G299600.3	Wheat	nucleus	60.63	63.05
HORVU7Hr1G070780.5	Barley	nucleus	60.77	62.93
TraesCS7B01G187600.1	Wheat	nucleus	60.49	62.91
OQU79937	Sorghum	nucleus	57.2	62.8
TraesCS7D01G295100.1	Wheat	nucleus	59.81	62.73
Zm00001d024543_P001	Maize	nucleus	52.54	57.68
VIT_15s0048g02310.t01	Wine grape	cytosol	11.66	51.52
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	40.6	39.0
VIT_15s0048g02290.t01	Wine grape	nucleus	14.54	33.02
Bra019599.1-P	Field mustard	nucleus	19.34	32.64
CDY00208	Canola	nucleus	19.34	32.64
AT5G24590.2	Thale cress	nucleus	20.03	32.37
CDY19828	Canola	nucleus	19.75	32.36
Bra036520.1-P	Field mustard	nucleus	19.75	32.36
Bra017980.1-P	Field mustard	nucleus	20.3	31.97
CDY08139	Canola	nucleus	20.03	31.47
CDX88115	Canola	cytosol	19.07	31.38
VIT_02s0025g03020.t01	Wine grape	nucleus	26.89	31.01
CDY05939	Canola	nucleus	19.62	30.89
Bra009774.1-P	Field mustard	nucleus	19.2	30.77
CDX80455	Canola	nucleus	19.07	30.48
AT3G49530.1	Thale cress	nucleus	19.2	29.85
AT4G35580.2	Thale cress	nucleus	21.81	29.78
VIT_15s0048g02320.t01	Wine grape	nucleus	14.13	29.18
KRH72602	Soybean	nucleus	23.32	28.86
VIT_16s0098g00760.t01	Wine grape	mitochondrion	24.97	28.26
KRH16970	Soybean	nucleus	22.5	27.8
Os09t0552800-00	Rice	nucleus	13.72	27.32
KRH53649	Soybean	nucleus	21.81	26.59
KRH64275	Soybean	nucleus	21.81	26.37
VIT_15s0048g02300.t01	Wine grape	nucleus	15.78	26.2
Solyc06g073050.2.1	Tomato	nucleus	21.26	26.05
PGSC0003DMT400069511	Potato	nucleus	21.95	25.4
AT1G33060.2	Thale cress	nucleus	22.63	25.31
CDY66161	Canola	nucleus	21.81	25.04
Bra010193.1-P	Field mustard	nucleus	21.81	25.0
CDY26922	Canola	nucleus	21.81	25.0
PGSC0003DMT400001498	Potato	nucleus	21.54	24.61
VIT_15s0048g02270.t01	Wine grape	nucleus	20.16	23.41
Solyc03g080090.2.1	Tomato	nucleus	20.16	23.37
Os01t0261200-01	Rice	cytosol	15.36	22.9
VIT_15s0048g02280.t01	Wine grape	golgi, nucleus, plasma membrane	15.5	22.11
Os03t0119966-01	Rice	nucleus	19.07	21.38
Os05t0426200-02	Rice	nucleus	12.89	20.94
Os02t0822400-01	Rice	nucleus	15.64	18.04
CDX87118	Canola	nucleus	19.75	17.31
Os08t0562200-02	Rice	nucleus	15.5	17.23
Os09t0493700-01	Rice	nucleus	15.78	16.38

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4344705	ProteinID:BAC99653.1	ProteinID:BAF22948.1	ProteinID:BAT03910.1
ncoils:Coil	ProteinID:EEE68077.1	EMBL:EU846994	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf
EnsemblPlantsGene:Os08g0157900	EnsemblPlants:Os08t0157900-01	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF102
UniProt:Q7EZD3	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI00001D8DA2	RefSeq:XP_015650289.1	SEG:seg

Description

NAC DOMAIN-CONTAINING PROTEIN 37Similar to NAM protein. (Os08t0157900-01)

Coordinates

chr8:-:3389030..3393349

Molecular Weight (calculated)

80530.9 Da

IEP (calculated)

4.398

GRAVY (calculated)

-0.744

Length

729 amino acids

Sequence
(BLAST)

001: MTVMELKKLP LGFRFHPTDE ELVRHYLKGK ITGQIRSEAD VIPEIDVCKC EPWDLPDKSL IRSDDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR
101: VIRSKGDKKK QQVIGMKKTL VFHRGRAPKG ERTGWIMHEY RTTEPEFESG EQGGYVLYRL FRKQEEKIER PSPDEVDRSG YSPTPSRSTP DNMEPIEDGN
201: TPLNRESPES ALHESPIDLP ALTEAQAAPI TRWLADRTDN ATTNEVNISH MPHHGLDGGA KASPSAGAFP QLIGSQQNIH DNNELATVSA PMLPHEDFNN
301: FPLGAIGNFD GNMNPRDPVE EFLNQTIADP DEHSSTTSKA QYDSDTGIIP TEFENHGVMQ GEFMDDLSGL ENLDFWPDDR NPQLSALYED TPLLPYDSTD
401: QDVLSMDSGA ESLQDLFNSM DDSNARNNVW GNEPFLQGTG FPMSWPLQPN SAFPNQGTAN RRLMLQLSES LSPDFDVSMT RDECEDEEPG IVVTSKYVNE
501: APEESTAEKD MPSDGDDAEP TGITILRRRH APTASSFSDG DDAESTGITI LRQHQAPNAS LLSDGDDAES TGITILRRRQ APTASSASSF TQQGAAVQRV
601: RLQSNLDAAP CSSVDGSSSC IINEGESERT MEKPEIEENA GSTLAEGGTC HEDDQKEHDA SAANAKSVLR LRKTAEGSDK ENKQEEEEGV LASHVRAPGN
701: KRGFPSYIIW LVLSVALVLL ISLGIYGWV

Best Arabidopsis Sequence Match ( AT1G33060.2 )
(BLAST)

001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKCEM QEKEDISSSS
601: SWQKQKKSLV QFSSVVIIVA VIVVLVEIWK ESRDAKCSFL FHQLDSFKGM FT

Arabidopsis Description

NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.