Factsheet for VIT_15s0048g02320.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g02310.t01	Wine grape	cytosol	35.13	75.15
VIT_15s0048g02300.t01	Wine grape	nucleus	79.04	63.55
VIT_15s0048g02290.t01	Wine grape	nucleus	43.06	47.35
GSMUA_Achr11P...	Banana	cytosol	22.66	42.33
VIT_15s0048g02270.t01	Wine grape	nucleus	62.61	35.19
VIT_17s0053g00740.t01	Wine grape	nucleus	21.53	31.93
VIT_19s0085g00950.t01	Wine grape	nucleus	21.81	27.4
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	22.38	27.24
VIT_02s0012g01040.t01	Wine grape	nucleus	22.1	21.37
VIT_06s0080g00970.t01	Wine grape	nucleus	22.38	20.36
VIT_15s0048g02280.t01	Wine grape	golgi, nucleus, plasma membrane	29.18	20.16
VIT_02s0025g03020.t01	Wine grape	nucleus	35.69	19.94
VIT_13s0019g05230.t01	Wine grape	nucleus	22.1	18.06
VIT_16s0098g00760.t01	Wine grape	mitochondrion	30.88	16.93
GSMUA_Achr1P03560_001	Banana	nucleus	27.48	16.9
Zm00001d049540_P002	Maize	cytosol	30.59	16.34
OQU79937	Sorghum	nucleus	30.31	16.11
GSMUA_Achr4P29170_001	Banana	nucleus	25.5	15.65
Zm00001d024543_P001	Maize	nucleus	28.61	15.21
VIT_18s0001g01820.t01	Wine grape	nucleus	24.65	15.21
VIT_13s0019g05240.t01	Wine grape	cytosol, nucleus, plastid	22.95	14.49
Os08t0157900-01	Rice	nucleus, plasma membrane	29.18	14.13
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	30.31	14.1
HORVU7Hr1G070780.5	Barley	nucleus	28.05	14.06
TraesCS7B01G187600.1	Wheat	nucleus	27.76	13.98
TraesCS7A01G299600.3	Wheat	nucleus	27.48	13.84
TraesCS7D01G295100.1	Wheat	nucleus	27.2	13.81
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	25.21	13.32
VIT_04s0044g01220.t01	Wine grape	nucleus	18.41	11.61

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:CCB61317	ProteinID:CCB61317.1	UniProt:F6I300	EMBL:FN596739
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF57	SUPFAM:SSF101941
UniParc:UPI000210A831	ArrayExpress:VIT_15s0048g02320	EnsemblPlantsGene:VIT_15s0048g02320	EnsemblPlants:VIT_15s0048g02320.t01	:	:

Description

No Description!

Coordinates

chr15:+:16477881..16480539

Molecular Weight (calculated)

38805.1 Da

IEP (calculated)

5.028

GRAVY (calculated)

-0.620

Length

353 amino acids

Sequence
(BLAST)

001: MSVGETIGAI LETLPAGFRF HPTDEELVDH HLKPKILGMD SQVEIIPEVD ICKWEPWELP GSSVIKTDDP EWFFFSLLDY KYSKGSRSNR KTKAGYWKPT
101: GKDRDILSGT NKEVIGAKKT LVFYIGRCHA ATRTNWVIHE YRADIAGLPA KEDSQLQGLL NDFTSTPPSS DWFSDTEQGL DWDLPSPSGF NNIYGSMQFQ
201: DGFDTAEFVV DPDEYHCEGL TGQGSPAVDG RNLNNGSAGR LSAGPQSPQK GVYGKDGGSS SNTDTAVLQG SCLQAKDRAE YGSVIDLLQN KNPIREFNRD
301: SKVTEKANRK RSSIWNEPVG MNKKGSFSSP ETASASHEPS SSPVMVIDIN AKV

Best Arabidopsis Sequence Match ( AT1G33060.1 )
(BLAST)

001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT

Arabidopsis Description

NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.