Factsheet for VIT_15s0048g02290.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g02310.t01	Wine grape	cytosol	41.74	81.21
VIT_15s0048g02320.t01	Wine grape	nucleus	47.35	43.06
GSMUA_Achr11P...	Banana	cytosol	24.92	42.33
VIT_15s0048g02300.t01	Wine grape	nucleus	57.01	41.69
VIT_17s0053g00740.t01	Wine grape	nucleus	26.48	35.71
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	28.35	31.38
VIT_19s0085g00950.t01	Wine grape	nucleus	26.48	30.25
VIT_15s0048g02270.t01	Wine grape	nucleus	52.02	26.59
VIT_02s0012g01040.t01	Wine grape	nucleus	27.1	23.84
VIT_15s0048g02280.t01	Wine grape	golgi, nucleus, plasma membrane	33.33	20.94
VIT_13s0019g05230.t01	Wine grape	nucleus	28.04	20.83
VIT_06s0080g00970.t01	Wine grape	nucleus	24.61	20.36
VIT_02s0025g03020.t01	Wine grape	nucleus	37.69	19.15
VIT_16s0098g00760.t01	Wine grape	mitochondrion	34.89	17.39
GSMUA_Achr1P03560_001	Banana	nucleus	30.84	17.25
GSMUA_Achr4P29170_001	Banana	nucleus	30.84	17.22
VIT_13s0019g05240.t01	Wine grape	cytosol, nucleus, plastid	28.04	16.1
OQU79937	Sorghum	nucleus	32.09	15.51
Zm00001d049540_P002	Maize	cytosol	31.78	15.43
Zm00001d024543_P001	Maize	nucleus	30.53	14.76
VIT_18s0001g01820.t01	Wine grape	nucleus	26.17	14.69
Os08t0157900-01	Rice	nucleus, plasma membrane	33.02	14.54
HORVU7Hr1G070780.5	Barley	nucleus	31.15	14.2
TraesCS7B01G187600.1	Wheat	nucleus	30.84	14.12
TraesCS7A01G299600.3	Wheat	nucleus	30.53	13.98
TraesCS7D01G295100.1	Wheat	nucleus	30.22	13.96
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	32.71	13.83
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	28.04	13.47
VIT_04s0044g01220.t01	Wine grape	nucleus	22.43	12.86

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:CCB61320	ProteinID:CCB61320.1	UniProt:F6I303	EMBL:FN596739
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF57	SUPFAM:SSF101941
UniParc:UPI000210A833	ArrayExpress:VIT_15s0048g02290	EnsemblPlantsGene:VIT_15s0048g02290	EnsemblPlants:VIT_15s0048g02290.t01	:	:

Description

No Description!

Coordinates

chr15:+:16461804..16463972

Molecular Weight (calculated)

36225.9 Da

IEP (calculated)

8.439

GRAVY (calculated)

-0.533

Length

321 amino acids

Sequence
(BLAST)

001: MIATILETLP VGFRFYPTDE ELVDNHLKLK ILGMESPVDI IPEVDICKWE PWELPVFSVI KTDDPEWFFF SLLDYKYSNG SRSNRATSAG YWKPTGQDRD
101: IFSGTNKEVI GTKKTLVFYR GRGRGAIRTN WVIHEYRANI AGLPANRAYV LCRLKRKTDE NTGSDIPIPD EANGLANNMT LGAGPSHYAS NIASNTRNYQ
201: VEDMTLEYSQ LLQASSLTSG LSPKECVQSP MDRPTSRLSS INQHRRENKS LLHDESRRFD APSIERLDNF VAQRVAPKSL KLTGNASNNE TLIAKLTKLS
301: CSMTKPEEKS VSIKDRTSFC Y

Best Arabidopsis Sequence Match ( AT4G35580.2 )
(BLAST)

001: MGAVSMESLP LGFRFRPTDE ELVNHYLRLK INGRHSDVRV IPDIDVCKWE PWDLPALSVI KTDDPEWFFF CPRDRKYPNG HRSNRATDSG YWKATGKDRS
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN
501: GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV

Arabidopsis Description

NTL9NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.