Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr2P09220_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G49530.1 | GSMUA_Achr2P09220_001 | AT5G19570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 32.75 | 64.83 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 55.92 | 55.83 |
| GSMUA_Achr11P... | Banana | cytosol | 17.6 | 53.44 |
| VIT_15s0048g02310.t01 | Wine grape | cytosol | 14.81 | 51.52 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 17.25 | 41.25 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 17.25 | 41.08 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 14.81 | 39.91 |
| GSMUA_Achr10P... | Banana | nucleus | 16.2 | 36.19 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 14.63 | 33.87 |
| CDX88115 | Canola | cytosol | 24.04 | 31.15 |
| AT5G24590.2 | Thale cress | nucleus | 24.39 | 31.04 |
| VIT_15s0048g02290.t01 | Wine grape | nucleus | 17.25 | 30.84 |
| Bra019599.1-P | Field mustard | nucleus | 23.17 | 30.79 |
| CDY00208 | Canola | nucleus | 23.17 | 30.79 |
| Bra009774.1-P | Field mustard | nucleus | 24.22 | 30.55 |
| CDX80455 | Canola | nucleus | 24.22 | 30.48 |
| Bra036520.1-P | Field mustard | nucleus | 23.52 | 30.34 |
| CDY19828 | Canola | nucleus | 23.52 | 30.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.47 | 29.86 |
| AT3G49530.1 | Thale cress | nucleus | 24.22 | 29.64 |
| CDY05939 | Canola | nucleus | 23.87 | 29.59 |
| CDY08139 | Canola | nucleus | 23.87 | 29.53 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 18.82 | 29.03 |
| GSMUA_Achr11P... | Banana | nucleus | 19.34 | 28.98 |
| Bra017980.1-P | Field mustard | nucleus | 23.34 | 28.94 |
| AT4G35580.2 | Thale cress | nucleus | 25.96 | 27.9 |
| VIT_15s0048g02320.t01 | Wine grape | nucleus | 16.9 | 27.48 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 16.9 | 27.09 |
| KRH16970 | Soybean | nucleus | 26.83 | 26.1 |
| KRH72602 | Soybean | nucleus | 26.66 | 25.98 |
| VIT_16s0098g00760.t01 | Wine grape | mitochondrion | 28.92 | 25.78 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 16.72 | 25.67 |
| VIT_02s0025g03020.t01 | Wine grape | nucleus | 27.87 | 25.32 |
| KRH64275 | Soybean | nucleus | 26.31 | 25.04 |
| KRH53649 | Soybean | nucleus | 25.96 | 24.92 |
| VIT_15s0048g02300.t01 | Wine grape | nucleus | 18.29 | 23.92 |
| GSMUA_Achr11P... | Banana | nucleus | 16.2 | 23.48 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 30.84 | 23.32 |
| Solyc06g073050.2.1 | Tomato | nucleus | 23.87 | 23.03 |
| AT1G33060.2 | Thale cress | nucleus | 26.13 | 23.01 |
| CDY66161 | Canola | nucleus | 25.26 | 22.83 |
| CDY26922 | Canola | nucleus | 25.26 | 22.8 |
| Bra010193.1-P | Field mustard | nucleus | 25.26 | 22.8 |
| PGSC0003DMT400001498 | Potato | nucleus | 25.09 | 22.57 |
| GSMUA_Achr11P... | Banana | nucleus | 17.07 | 22.37 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 15.85 | 22.3 |
| PGSC0003DMT400069511 | Potato | nucleus | 24.04 | 21.9 |
| VIT_15s0048g02280.t01 | Wine grape | golgi, nucleus, plasma membrane | 18.99 | 21.33 |
| Solyc03g080090.2.1 | Tomato | nucleus | 23.34 | 21.3 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 21.95 | 20.76 |
| VIT_15s0048g02270.t01 | Wine grape | nucleus | 22.3 | 20.38 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 19.69 | 20.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.64 | 18.8 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 17.07 | 18.39 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 18.29 | 17.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.94 | 16.74 |
| CDX87118 | Canola | nucleus | 23.34 | 16.11 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 16.2 | 15.68 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 16.38 | 14.66 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 15.16 | 14.5 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr1G03560_001 |
| EnsemblPlants:GSMUA_Achr1P03560_001 | EnsemblPlants:GSMUA_Achr1T03560_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0RWR4 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF114 | SUPFAM:SSF101941 |
| UniParc:UPI000294EBA9 | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G03560_001]
Coordinates
chr1:+:2954798..2958655
Molecular Weight (calculated)
64135.4 Da
IEP (calculated)
4.750
GRAVY (calculated)
-0.480
Length
574 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIREMAVLS VESFPLGFRF RPTDVELVNH YLKGKITGRI KSEDEVISEI DICKCEPWDL PDISLIKSSD SEWFFFSPKD RKYPNGNRSN RATKAGYWKA
101: TGKDRMIRSI SRVPTIIGTK KTLVFYQGRA PSGVRTTWVM HEYRTTEKEL VLLFHFLSNP VQGGFVLCRL FKKPEEKTQI SDIDDCTEGN VGEMESGDPS
201: PAPAPAPGML SPVEMQQGVE ATVEVVSPLD HKLPGSYLQE NLQPLPPTSD MQSSGVHELL EESHCSETVV SDPPCETLVG NEFGLRLDDL PQYLNPDFDK
301: LGGVDQEFPE FDYHSNSPRI TYTGHAFDAG VDWEFSSGLN QCDSVEDDSV TEFLDAVLCD PYECSPEVSY VCRSLNTEFE PQGQICVSTD ETPWDSLSGK
401: KSKRGSDKDD KATVLDDSIG FSGEIYKLPV CSSTLSQKNS CIVPTRQHRI LVFPNHNLSQ NVSLMDSASA LHQETARMSN CDKAGIQIST HNNLQELDCL
501: IEPQSLLMRR LRLQKFVRKG SVPSTDQVLS TRNDVMKSAA NEVREILKHQ FSEEQPVFSR IASTTSEGFS SHGN
101: TGKDRMIRSI SRVPTIIGTK KTLVFYQGRA PSGVRTTWVM HEYRTTEKEL VLLFHFLSNP VQGGFVLCRL FKKPEEKTQI SDIDDCTEGN VGEMESGDPS
201: PAPAPAPGML SPVEMQQGVE ATVEVVSPLD HKLPGSYLQE NLQPLPPTSD MQSSGVHELL EESHCSETVV SDPPCETLVG NEFGLRLDDL PQYLNPDFDK
301: LGGVDQEFPE FDYHSNSPRI TYTGHAFDAG VDWEFSSGLN QCDSVEDDSV TEFLDAVLCD PYECSPEVSY VCRSLNTEFE PQGQICVSTD ETPWDSLSGK
401: KSKRGSDKDD KATVLDDSIG FSGEIYKLPV CSSTLSQKNS CIVPTRQHRI LVFPNHNLSQ NVSLMDSASA LHQETARMSN CDKAGIQIST HNNLQELDCL
501: IEPQSLLMRR LRLQKFVRKG SVPSTDQVLS TRNDVMKSAA NEVREILKHQ FSEEQPVFSR IASTTSEGFS SHGN
001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
Arabidopsis Description
NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.