Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 23.39 | 75.0 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 39.25 | 60.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.11 | 57.75 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 36.83 | 56.85 |
| GSMUA_Achr11P... | Banana | nucleus | 55.91 | 54.31 |
| GSMUA_Achr11P... | Banana | cytosol | 23.39 | 46.03 |
| GSMUA_Achr10P... | Banana | nucleus | 31.45 | 45.53 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 25.81 | 45.07 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 27.15 | 40.73 |
| PGSC0003DMT400055322 | Potato | nucleus | 54.84 | 36.3 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 59.14 | 36.24 |
| Solyc02g036430.1.1 | Tomato | nucleus | 54.57 | 35.93 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 51.08 | 34.17 |
| AT5G17260.1 | Thale cress | nucleus | 43.55 | 34.03 |
| CDY16943 | Canola | nucleus | 45.43 | 34.0 |
| AT3G03200.1 | Thale cress | nucleus | 43.28 | 33.61 |
| Bra021366.1-P | Field mustard | nucleus | 43.28 | 33.54 |
| CDY49932 | Canola | nucleus | 43.01 | 33.4 |
| CDY43143 | Canola | nucleus | 42.74 | 33.26 |
| CDY28745 | Canola | cytosol | 42.74 | 33.26 |
| Bra032009.1-P | Field mustard | nucleus | 42.74 | 33.26 |
| Os03t0119966-01 | Rice | nucleus | 57.53 | 32.92 |
| CDX70745 | Canola | cytosol | 43.55 | 32.79 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 31.45 | 32.68 |
| CDX78734 | Canola | cytosol | 42.74 | 32.45 |
| Bra006392.1-P | Field mustard | cytosol | 42.74 | 32.45 |
| Bra039745.1-P | Field mustard | nucleus | 47.58 | 32.42 |
| Zm00001d027395_P009 | Maize | nucleus | 57.8 | 32.38 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 58.06 | 32.34 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 55.65 | 32.19 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 55.65 | 32.14 |
| EER95621 | Sorghum | nucleus | 57.8 | 31.52 |
| Zm00001d048493_P004 | Maize | nucleus | 58.06 | 31.44 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 57.26 | 30.69 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 23.92 | 30.69 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 56.99 | 30.68 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 55.38 | 30.65 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 56.72 | 30.62 |
| CDY60870 | Canola | nucleus | 47.31 | 30.5 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 56.99 | 30.37 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 54.3 | 29.79 |
| CDY16427 | Canola | nucleus | 47.58 | 29.75 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 29.57 | 29.41 |
| Bra008567.1-P | Field mustard | nucleus | 35.22 | 29.31 |
| GSMUA_Achr11P... | Banana | nucleus | 31.18 | 29.29 |
| AT1G65910.1 | Thale cress | nucleus | 49.46 | 29.16 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 30.11 | 27.45 |
| CDY21216 | Canola | nucleus | 31.72 | 27.44 |
| GSMUA_Achr11P... | Banana | nucleus | 29.84 | 25.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.41 | 22.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.15 | 21.13 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 33.06 | 20.95 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 30.65 | 19.83 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 27.42 | 19.14 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 30.11 | 18.89 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 29.03 | 18.82 |
| Solyc02g081270.2.1 | Tomato | nucleus | 51.08 | 18.46 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 27.69 | 16.07 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 25.81 | 16.0 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 29.3 | 14.36 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr1G02820_001 |
| EnsemblPlants:GSMUA_Achr1P02820_001 | EnsemblPlants:GSMUA_Achr1T02820_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0RWJ0 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 |
| UniParc:UPI0002959AE0 | : | : | : | : | : |
Description
no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G02820_001]
Coordinates
chr1:+:2287171..2289280
Molecular Weight (calculated)
41754.9 Da
IEP (calculated)
5.312
GRAVY (calculated)
-0.585
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVTLPPGF RFHPTDEELV GYYLKKKING HNLELEIIPE VDLYKCEPWE LPEKSFLPSK DLEWYFFSPR DRKYPNGSRT NRATQSGYWK ATGKDRRVSS
101: QRRAVGMKKT LVYYRGRAPH GSRTDWVMHE YRLDENECET TASGFQDSYA LCRVFKKSAP GPKILEHYGS SCKGSTELSP TVNGNCYPFP PEICSSKMVQ
201: GSSPNVSASA DVKWMQYLSP EAFTDAPPFL DPACFPYIPS KVDIALECAR LQHRLSLPPL EMDDFSQNSL ADSNNASHLG GHQESASQAD VVLREILSVA
301: SASQEPTMCS SDYPNVFAGS STHFDEFACL LGLERRTEGM PFPEINDFGE ELKEEHKTAE SSTDVRISEL SV
101: QRRAVGMKKT LVYYRGRAPH GSRTDWVMHE YRLDENECET TASGFQDSYA LCRVFKKSAP GPKILEHYGS SCKGSTELSP TVNGNCYPFP PEICSSKMVQ
201: GSSPNVSASA DVKWMQYLSP EAFTDAPPFL DPACFPYIPS KVDIALECAR LQHRLSLPPL EMDDFSQNSL ADSNNASHLG GHQESASQAD VVLREILSVA
301: SASQEPTMCS SDYPNVFAGS STHFDEFACL LGLERRTEGM PFPEINDFGE ELKEEHKTAE SSTDVRISEL SV
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.