Factsheet for GSMUA_AchrUn_randomP08190_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018364	Potato	mitochondrion, nucleus	23.1	70.69
GSMUA_Achr3P13880_001	Banana	cytosol	38.31	56.67
GSMUA_Achr9P23940_001	Banana	cytosol	37.75	55.6
GSMUA_Achr1P02820_001	Banana	nucleus	57.75	55.11
GSMUA_Achr11P...	Banana	nucleus	53.24	49.35
GSMUA_Achr6P03200_001	Banana	cytosol	27.04	45.07
GSMUA_Achr11P...	Banana	cytosol	23.66	44.44
GSMUA_Achr10P...	Banana	nucleus	32.11	44.36
GSMUA_Achr3P18070_001	Banana	nucleus	28.17	40.32
GSMUA_Achr8P13430_001	Banana	nucleus	55.21	32.29
AT5G17260.1	Thale cress	nucleus	43.1	32.14
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	26.2	32.07
PGSC0003DMT400055322	Potato	nucleus	50.7	32.03
Solyc02g036430.1.1	Tomato	nucleus	50.7	31.86
CDY28745	Canola	cytosol	42.54	31.59
CDY43143	Canola	nucleus	42.54	31.59
Bra032009.1-P	Field mustard	nucleus	42.25	31.38
AT3G03200.1	Thale cress	nucleus	42.25	31.32
Bra021366.1-P	Field mustard	nucleus	41.69	30.83
CDX78734	Canola	cytosol	42.54	30.82
Bra006392.1-P	Field mustard	cytosol	42.54	30.82
CDY49932	Canola	nucleus	41.41	30.69
CDY16943	Canola	nucleus	42.82	30.58
CDX70745	Canola	cytosol	42.54	30.57
Bra039745.1-P	Field mustard	nucleus	46.2	30.04
Os03t0119966-01	Rice	nucleus	54.65	29.85
GSMUA_Achr5P03360_001	Banana	nucleus	29.86	29.61
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	46.2	29.5
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	54.93	29.19
Zm00001d027395_P009	Maize	nucleus	53.8	28.77
CDY60870	Canola	nucleus	46.2	28.42
EER95621	Sorghum	nucleus	54.37	28.3
Zm00001d048493_P004	Maize	nucleus	54.37	28.09
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	54.37	27.93
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	54.08	27.87
GSMUA_Achr5P18140_001	Banana	nucleus	29.3	27.81
KRH72917	Soybean	cytosol, nucleus, plasma membrane	50.14	27.68
CDY16427	Canola	nucleus	46.2	27.56
TraesCS5A01G519300.1	Wheat	cytosol, nucleus, peroxisome	53.8	27.52
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	54.08	27.51
KRH17271	Soybean	cytosol, nucleus, plasma membrane	49.58	27.33
KRH30885	Soybean	cytosol, nucleus, vacuole	50.99	26.93
AT1G65910.1	Thale cress	nucleus	47.32	26.62
GSMUA_Achr7P23330_001	Banana	nucleus	30.42	26.47
Bra008567.1-P	Field mustard	nucleus	32.96	26.17
KRG98003	Soybean	cytosol, nucleus, plasma membrane	49.3	25.81
GSMUA_Achr11P...	Banana	nucleus	28.45	25.51
CDY21216	Canola	nucleus	29.58	24.42
GSMUA_Achr11P...	Banana	nucleus	29.86	24.2
GSMUA_AchrUn_...	Banana	nucleus	34.93	21.79
GSMUA_Achr8P24280_001	Banana	nucleus	33.24	20.1
GSMUA_Achr4P29170_001	Banana	nucleus	31.27	19.3
GSMUA_Achr5P23620_001	Banana	nucleus	28.17	18.76
GSMUA_Achr1P03560_001	Banana	nucleus	29.86	18.47
GSMUA_AchrUn_...	Banana	nucleus	24.51	18.2
GSMUA_Achr9P23580_001	Banana	plastid	27.89	16.69
Solyc02g081270.2.1	Tomato	nucleus	47.89	16.52
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	26.2	15.5
GSMUA_Achr2P04010_001	Banana	plastid	27.32	15.13
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	29.86	13.97

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG08190_001
EnsemblPlants:GSMUA_AchrUn_randomP08190_001	EnsemblPlants:GSMUA_AchrUn_randomT08190_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0U7D0	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF6	SUPFAM:SSF101941
UniParc:UPI000295301B	:	:	:	:	:

Description

no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08190_001]

Coordinates

chrchrUn_random:-:35079984..35082665

Molecular Weight (calculated)

40494.9 Da

IEP (calculated)

8.772

GRAVY (calculated)

-0.672

Length

355 amino acids

Sequence
(BLAST)

001: MAPVTLPPGF RFHPTDEELV AYYLKRKING YRFELEIIPE VDLYKCEPWE LPGISFLPIS ILNHKAYRER KKHEQKKSFL PSKDLEWYFF SPRDRKYPNG
101: SRTNRATRAG YWKATGKDRK VSFQGRAVGT KKTLVYYKGR APRGSRTHWV MHEYRLDEKE SEMPSGLQES YALCRVFMKS TTAGAKIIEH YGSPRVEPLQ
201: WKPADSHTAE LSSDRIKIGE EFGSRGRPSP SETHSSETIQ GSTLDASASE NRQWMQYLSE EAFATGPTFH DPACFPCTPR KIDIEIECAR LQRRLTLPPL
301: EMDDFSCNSL NDSKASLSGT SRGSASQVEI LQEVLSVASA TRDLINSSIY PNIFC

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.