Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039745.1-P | Field mustard | nucleus | 91.43 | 99.63 |
| CDY60870 | Canola | nucleus | 93.78 | 96.71 |
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 14.29 | 73.28 |
| AT1G65910.1 | Thale cress | nucleus | 73.45 | 69.26 |
| CDY71253 | Canola | cytosol | 18.32 | 61.24 |
| CDX92153 | Canola | nucleus | 21.51 | 56.64 |
| CDX95832 | Canola | nucleus | 21.51 | 56.64 |
| CDY70627 | Canola | cytosol | 15.46 | 55.76 |
| CDY41351 | Canola | plastid | 13.45 | 47.9 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 29.75 | 47.58 |
| GSMUA_Achr11P... | Banana | nucleus | 30.08 | 46.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.56 | 46.2 |
| CDY10502 | Canola | nucleus | 22.69 | 43.97 |
| CDY42413 | Canola | nucleus | 22.35 | 43.04 |
| CDX67739 | Canola | nucleus | 22.35 | 42.77 |
| CDX90431 | Canola | nucleus | 20.5 | 42.66 |
| CDY01508 | Canola | nucleus | 20.34 | 42.31 |
| CDX77674 | Canola | nucleus | 20.17 | 42.25 |
| CDY59580 | Canola | nucleus | 20.84 | 42.18 |
| CDX78816 | Canola | nucleus | 20.5 | 41.78 |
| CDY44498 | Canola | nucleus | 20.5 | 41.78 |
| CDY63046 | Canola | nucleus | 20.34 | 41.72 |
| CDX87703 | Canola | nucleus | 20.5 | 41.5 |
| PGSC0003DMT400055322 | Potato | nucleus | 38.82 | 41.1 |
| Solyc02g036430.1.1 | Tomato | nucleus | 38.49 | 40.53 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 44.87 | 39.97 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 43.19 | 39.91 |
| CDY28745 | Canola | cytosol | 31.6 | 39.33 |
| CDY43143 | Canola | nucleus | 31.43 | 39.12 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 42.18 | 39.04 |
| CDX84070 | Canola | nucleus | 18.49 | 38.87 |
| CDY16943 | Canola | nucleus | 32.27 | 38.63 |
| CDX78734 | Canola | cytosol | 31.76 | 38.57 |
| CDX70745 | Canola | cytosol | 31.93 | 38.46 |
| CDY66060 | Canola | nucleus | 18.49 | 38.46 |
| CDY67205 | Canola | nucleus | 18.49 | 38.46 |
| CDY49932 | Canola | nucleus | 30.76 | 38.2 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 42.69 | 37.8 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 42.52 | 37.32 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 32.27 | 34.53 |
| Os03t0119966-01 | Rice | nucleus | 37.65 | 34.46 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 35.13 | 34.43 |
| Zm00001d027395_P009 | Maize | nucleus | 37.48 | 33.58 |
| EER95621 | Sorghum | nucleus | 38.15 | 33.28 |
| CDX86970 | Canola | nucleus | 17.48 | 32.91 |
| Zm00001d048493_P004 | Maize | nucleus | 37.82 | 32.75 |
| CDY21216 | Canola | nucleus | 23.53 | 32.56 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 37.65 | 32.42 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 37.31 | 31.99 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 37.48 | 31.95 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 36.81 | 31.79 |
| CDY46459 | Canola | nucleus | 16.13 | 31.58 |
| CDY43785 | Canola | nucleus | 17.65 | 30.52 |
| CDX81124 | Canola | nucleus | 17.31 | 30.12 |
| CDX84485 | Canola | nucleus | 17.31 | 29.77 |
| CDY44793 | Canola | nucleus | 17.48 | 29.71 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 15.97 | 27.7 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 15.63 | 26.96 |
| CDY04487 | Canola | cytosol | 15.63 | 26.96 |
| CDY09128 | Canola | cytosol | 15.46 | 26.82 |
| CDX70995 | Canola | cytosol | 14.96 | 26.65 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 15.13 | 26.63 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 14.96 | 26.25 |
| CDX88803 | Canola | cytosol | 14.79 | 26.11 |
| CDX92368 | Canola | cytosol | 14.45 | 25.67 |
| CDX69911 | Canola | nucleus | 18.32 | 24.89 |
| CDY21575 | Canola | nucleus | 18.15 | 24.88 |
| CDX78356 | Canola | nucleus | 14.96 | 24.52 |
| CDY00208 | Canola | nucleus | 17.65 | 24.31 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 21.51 | 23.84 |
| CDY00676 | Canola | nucleus | 17.14 | 23.83 |
| CDX88115 | Canola | cytosol | 17.65 | 23.7 |
| CDY41352 | Canola | nucleus | 16.64 | 23.52 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 20.34 | 23.45 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 22.02 | 23.39 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 20.34 | 23.31 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 21.68 | 23.29 |
| CDY00946 | Canola | nucleus | 17.65 | 23.28 |
| CDX80455 | Canola | nucleus | 17.82 | 23.25 |
| CDY19828 | Canola | nucleus | 17.31 | 23.15 |
| CDY41353 | Canola | nucleus | 17.14 | 23.13 |
| CDY08601 | Canola | nucleus, plastid | 17.65 | 23.08 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 21.18 | 22.66 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 21.34 | 22.44 |
| CDY08139 | Canola | nucleus | 17.31 | 22.2 |
| CDX69392 | Canola | nucleus | 15.97 | 22.2 |
| CDX73920 | Canola | nucleus | 16.64 | 22.15 |
| CDY05939 | Canola | nucleus | 17.14 | 22.03 |
| CDY00677 | Canola | nucleus | 16.47 | 22.02 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 16.81 | 21.93 |
| CDY25752 | Canola | nucleus | 18.66 | 21.81 |
| CDY34716 | Canola | nucleus | 10.59 | 21.43 |
| CDX93723 | Canola | nucleus | 19.83 | 21.22 |
| CDX73305 | Canola | nucleus | 18.32 | 20.92 |
| Solyc02g081270.2.1 | Tomato | nucleus | 35.13 | 20.31 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 18.49 | 20.15 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 18.99 | 20.07 |
| CDY12515 | Canola | plastid | 18.32 | 20.0 |
| CDX91785 | Canola | nucleus | 17.82 | 19.67 |
| CDY28397 | Canola | nucleus | 18.32 | 18.86 |
| CDY70628 | Canola | golgi | 12.44 | 18.69 |
| CDX73304 | Canola | nucleus | 17.98 | 18.35 |
| CDY66161 | Canola | nucleus | 19.5 | 18.27 |
| CDY26922 | Canola | nucleus | 19.5 | 18.24 |
| CDX87118 | Canola | nucleus | 17.48 | 12.5 |
| CDX86969 | Canola | cytosol | 0.34 | 1.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FUA1 | UniProt:A0A078FUA1 | EnsemblPlants:CDY16427 | ProteinID:CDY16427 |
| ProteinID:CDY16427.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00090982001 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 | UniParc:UPI0004EF4CED | SEG:seg | : |
Description
BnaA02g12310DBnaA02g12310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUA1]
Coordinates
chrLK032063:-:576644..580018
Molecular Weight (calculated)
67609.2 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.597
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPDAVDSETN SEDRVKKGFG SFSFTLNFCF IKKCSPFVFY LVFLILILRT
101: LRKSLLPSKD LEWFFFSPRD RKYPNGSRTN RATKAGYWKA TGKDRKVTSH SRTVGTKKTL VYYRGRAPHG SRTDWVMHEY RLEEQECDSK SGIQDAYALC
201: RVFKKSALAN KLEEQHHGMK RKKATTNSEK STSSTCLYSD GMYENLENSG YPVSPDHGLT QLGNISSSDM ETIENKWSHS MSHDTSYNFP AQSQFCSQYG
301: TITYPPSKAE IAFECARLKN RMLPPAPPLH VEDLAHSEHL GTNVANDTDQ MLSKIIALAQ ASHEPHNSLG SWEFASASGN FQGDVCYPGE KASGSWVEAN
401: MKAVDMQAHD GRFKEERIVE NLRWVGVSNK ELEKSFIEEH STVVPIEDIW SYRTDSHEHQ DGEGVNNNGD VDDVYTLEFS ENELNANNSD KINNDDHDAT
501: SSPRFEMVNK VEVSHGLSVT TRQVTNTCFQ QIVPSQTVIV YINPTGTVNC GHEKKLTEEV HVVKQINPRI DSFVSKILGP WRRFAYLLVS FISSY
101: LRKSLLPSKD LEWFFFSPRD RKYPNGSRTN RATKAGYWKA TGKDRKVTSH SRTVGTKKTL VYYRGRAPHG SRTDWVMHEY RLEEQECDSK SGIQDAYALC
201: RVFKKSALAN KLEEQHHGMK RKKATTNSEK STSSTCLYSD GMYENLENSG YPVSPDHGLT QLGNISSSDM ETIENKWSHS MSHDTSYNFP AQSQFCSQYG
301: TITYPPSKAE IAFECARLKN RMLPPAPPLH VEDLAHSEHL GTNVANDTDQ MLSKIIALAQ ASHEPHNSLG SWEFASASGN FQGDVCYPGE KASGSWVEAN
401: MKAVDMQAHD GRFKEERIVE NLRWVGVSNK ELEKSFIEEH STVVPIEDIW SYRTDSHEHQ DGEGVNNNGD VDDVYTLEFS ENELNANNSD KINNDDHDAT
501: SSPRFEMVNK VEVSHGLSVT TRQVTNTCFQ QIVPSQTVIV YINPTGTVNC GHEKKLTEEV HVVKQINPRI DSFVSKILGP WRRFAYLLVS FISSY
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.