Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009456.1-P | Field mustard | cytosol, nucleus, plastid | 99.28 | 99.28 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 94.58 | 93.57 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 77.62 | 83.33 |
| CDY70627 | Canola | cytosol | 24.73 | 83.03 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 83.21 | 82.91 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 77.08 | 82.27 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 83.94 | 82.01 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 82.13 | 80.39 |
| KRH34662 | Soybean | cytosol | 10.65 | 64.84 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 61.01 | 62.94 |
| CDY41351 | Canola | plastid | 18.41 | 61.08 |
| CDY71253 | Canola | cytosol | 15.88 | 49.44 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 47.83 | 47.41 |
| Solyc05g055470.2.1 | Tomato | nucleus | 44.22 | 45.04 |
| CDX95832 | Canola | nucleus | 18.23 | 44.69 |
| CDX92153 | Canola | nucleus | 18.05 | 44.25 |
| PGSC0003DMT400060090 | Potato | nucleus | 42.6 | 44.11 |
| Solyc11g008000.1.1 | Tomato | nucleus | 41.7 | 43.75 |
| PGSC0003DMT400079789 | Potato | cytosol, nucleus, plastid | 42.42 | 43.28 |
| CDX81124 | Canola | nucleus | 23.47 | 38.01 |
| CDX77674 | Canola | nucleus | 18.59 | 36.27 |
| CDY44793 | Canola | nucleus | 22.74 | 36.0 |
| CDY63046 | Canola | nucleus | 18.77 | 35.86 |
| CDY10502 | Canola | nucleus | 19.68 | 35.5 |
| CDY46459 | Canola | nucleus | 19.31 | 35.2 |
| CDY43785 | Canola | nucleus | 21.84 | 35.17 |
| CDX84485 | Canola | nucleus | 21.84 | 34.97 |
| CDY42413 | Canola | nucleus | 19.49 | 34.95 |
| CDX67739 | Canola | nucleus | 19.31 | 34.41 |
| CDY41353 | Canola | nucleus | 27.26 | 34.24 |
| CDX90431 | Canola | nucleus | 17.51 | 33.92 |
| CDY01508 | Canola | nucleus | 17.51 | 33.92 |
| CDY41352 | Canola | nucleus | 25.63 | 33.73 |
| CDY59580 | Canola | nucleus | 17.87 | 33.67 |
| CDY00676 | Canola | nucleus | 25.81 | 33.41 |
| CDX87703 | Canola | nucleus | 17.69 | 33.33 |
| CDY44498 | Canola | nucleus | 17.51 | 33.22 |
| KRG92121 | Soybean | cytosol | 36.1 | 33.11 |
| CDX78816 | Canola | nucleus | 17.33 | 32.88 |
| CDX84070 | Canola | nucleus | 16.61 | 32.51 |
| CDY66060 | Canola | nucleus | 16.61 | 32.17 |
| CDY67205 | Canola | nucleus | 16.61 | 32.17 |
| CDY00946 | Canola | nucleus | 25.99 | 31.93 |
| CDY08601 | Canola | nucleus, plastid | 25.99 | 31.65 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 25.63 | 31.14 |
| CDX73920 | Canola | nucleus | 24.55 | 30.43 |
| CDY00677 | Canola | nucleus | 24.37 | 30.34 |
| CDX78356 | Canola | nucleus | 19.86 | 30.3 |
| CDX86970 | Canola | nucleus | 17.15 | 30.06 |
| CDX69911 | Canola | nucleus | 23.65 | 29.91 |
| CDY21575 | Canola | nucleus | 23.29 | 29.72 |
| CDY70628 | Canola | golgi | 20.76 | 29.04 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 31.95 | 27.57 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 31.77 | 27.33 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 31.59 | 27.3 |
| CDY04487 | Canola | cytosol | 16.97 | 27.25 |
| Os08t0562200-02 | Rice | nucleus | 31.95 | 26.98 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 16.79 | 26.96 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 31.23 | 26.91 |
| EES06041 | Sorghum | nucleus | 31.59 | 26.84 |
| TraesCS7D01G283800.1 | Wheat | nucleus | 31.23 | 26.78 |
| Os02t0822400-01 | Rice | nucleus | 30.51 | 26.74 |
| Zm00001d049913_P001 | Maize | plastid | 30.69 | 26.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.92 | 26.57 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 30.87 | 26.47 |
| OQU80699 | Sorghum | plastid | 31.95 | 26.42 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 16.07 | 26.33 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 16.07 | 26.25 |
| CDY09128 | Canola | cytosol | 16.25 | 26.24 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 16.25 | 26.24 |
| CDX88803 | Canola | cytosol | 15.88 | 26.11 |
| CDX70995 | Canola | cytosol | 15.7 | 26.05 |
| Zm00001d031898_P001 | Maize | plastid | 31.05 | 25.75 |
| Zm00001d051879_P001 | Maize | nucleus | 30.14 | 25.42 |
| CDX92368 | Canola | cytosol | 15.34 | 25.37 |
| CDY25752 | Canola | nucleus | 23.1 | 25.15 |
| CDY43143 | Canola | nucleus | 21.66 | 25.1 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 27.08 | 25.0 |
| TraesCSU01G135000.1 | Wheat | nucleus | 31.77 | 24.82 |
| CDY28745 | Canola | cytosol | 21.3 | 24.69 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 26.17 | 24.45 |
| CDY16943 | Canola | nucleus | 21.84 | 24.35 |
| CDY49932 | Canola | nucleus | 20.94 | 24.22 |
| CDX70745 | Canola | cytosol | 21.48 | 24.09 |
| CDX78734 | Canola | cytosol | 21.12 | 23.88 |
| CDY12515 | Canola | plastid | 23.29 | 23.67 |
| CDY00208 | Canola | nucleus | 18.41 | 23.61 |
| CDY05939 | Canola | nucleus | 19.49 | 23.33 |
| CDX73305 | Canola | nucleus | 21.84 | 23.22 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 26.35 | 22.78 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 26.35 | 22.78 |
| CDX93723 | Canola | nucleus | 22.74 | 22.66 |
| CDY19828 | Canola | nucleus | 17.87 | 22.25 |
| CDY08139 | Canola | nucleus | 18.59 | 22.2 |
| CDY60870 | Canola | nucleus | 23.1 | 22.18 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 21.84 | 22.16 |
| CDX88115 | Canola | cytosol | 17.69 | 22.12 |
| CDY34716 | Canola | nucleus | 11.73 | 22.11 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 22.2 | 21.85 |
| CDX91785 | Canola | nucleus | 21.12 | 21.71 |
| CDY16427 | Canola | nucleus | 23.29 | 21.68 |
| CDY28397 | Canola | nucleus | 22.56 | 21.63 |
| CDX80455 | Canola | nucleus | 17.69 | 21.49 |
| CDX73304 | Canola | nucleus | 22.56 | 21.44 |
| CDY21216 | Canola | nucleus | 15.52 | 20.0 |
| CDY66161 | Canola | nucleus | 19.86 | 17.32 |
| CDY26922 | Canola | nucleus | 19.68 | 17.14 |
| CDX69392 | Canola | nucleus | 9.39 | 12.15 |
| CDX87118 | Canola | nucleus | 17.51 | 11.66 |
| CDX86969 | Canola | cytosol | 1.26 | 6.54 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078C0E7 | EnsemblPlants:CDX70227 | ProteinID:CDX70227 | ProteinID:CDX70227.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00136356001 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF43 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EF4095 | SEG:seg |
Description
BnaA10g25760D
Coordinates
chrLK031790:-:3653197..3655836
Molecular Weight (calculated)
62085.0 Da
IEP (calculated)
4.225
GRAVY (calculated)
-0.595
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFNFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRAVGM KKTLVYHKGR APRGERTNWV MHEYRLTDEE LKRAGAPLDA FVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDKMTFVPEQ DALSEGLAVD
201: DDVYVDIDEI DEKPENLVVY DAIPVQTNYC HGESSNNAES GNYEDSGNYV VDSGGYIEQP TETFEEDQKP IIRDCSIQPC SLYPVEQIGC GVEDENAVNL
301: ETSNNNVFVA DPCYSDIPIE ADYLPDEPFM DPSNNLPLCD DLYLETNDLS GGGLQDDFNF EDYLNFFDDE EAQNLTLDVS QLLGSQDAPP EQEGLDQKPS
401: PEELEKEVVE KKESGEGSSS KQDADVTDFD SDSKYPFLKK SSHMFGVPPS FASQFQTKDA AIRLHAAQSS GSVHVTAGMI RISNMTPAVD SDMGWAYDKS
501: GDLNVVLSFG LVQRDDAMSK TGGISATRAM LIFLCLWVLL LSVSFKIVTM VSAR
101: IRNGSRAVGM KKTLVYHKGR APRGERTNWV MHEYRLTDEE LKRAGAPLDA FVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDKMTFVPEQ DALSEGLAVD
201: DDVYVDIDEI DEKPENLVVY DAIPVQTNYC HGESSNNAES GNYEDSGNYV VDSGGYIEQP TETFEEDQKP IIRDCSIQPC SLYPVEQIGC GVEDENAVNL
301: ETSNNNVFVA DPCYSDIPIE ADYLPDEPFM DPSNNLPLCD DLYLETNDLS GGGLQDDFNF EDYLNFFDDE EAQNLTLDVS QLLGSQDAPP EQEGLDQKPS
401: PEELEKEVVE KKESGEGSSS KQDADVTDFD SDSKYPFLKK SSHMFGVPPS FASQFQTKDA AIRLHAAQSS GSVHVTAGMI RISNMTPAVD SDMGWAYDKS
501: GDLNVVLSFG LVQRDDAMSK TGGISATRAM LIFLCLWVLL LSVSFKIVTM VSAR
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
Arabidopsis Description
NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.