Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P04010_001 | Banana | plastid | 66.67 | 62.4 |
| CDY70627 | Canola | cytosol | 15.33 | 55.76 |
| CDY41351 | Canola | plastid | 13.5 | 48.5 |
| KRH34662 | Soybean | cytosol | 7.0 | 46.15 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 45.17 | 45.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.83 | 44.98 |
| GSMUA_Achr10P... | Banana | nucleus | 16.0 | 37.35 |
| GSMUA_Achr11P... | Banana | cytosol | 11.17 | 35.45 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 13.83 | 34.58 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 13.83 | 34.44 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 12.17 | 34.27 |
| PGSC0003DMT400079791 | Potato | nucleus | 21.33 | 32.0 |
| PGSC0003DMT400060087 | Potato | nucleus | 20.0 | 30.69 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 12.67 | 30.65 |
| Solyc05g055480.2.1 | Tomato | nucleus | 19.67 | 30.57 |
| Solyc11g008000.1.1 | Tomato | nucleus | 25.5 | 28.98 |
| Bra028790.1-P | Field mustard | cytosol, nucleus, plastid | 24.33 | 28.97 |
| Solyc05g055470.2.1 | Tomato | nucleus | 26.0 | 28.68 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 26.67 | 28.62 |
| PGSC0003DMT400060090 | Potato | nucleus | 25.33 | 28.41 |
| PGSC0003DMT400079789 | Potato | cytosol, nucleus, plastid | 25.67 | 28.36 |
| AT3G10500.1 | Thale cress | cytosol, nucleus, vacuole | 25.33 | 27.69 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 25.67 | 27.5 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 25.83 | 27.39 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 25.33 | 27.34 |
| Bra005804.1-P | Field mustard | cytosol, nucleus, vacuole | 25.83 | 27.34 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 23.5 | 27.33 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 23.5 | 27.17 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 25.0 | 27.08 |
| Bra009456.1-P | Field mustard | cytosol, nucleus, plastid | 25.0 | 27.08 |
| Solyc11g008010.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 20.83 | 26.88 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 25.33 | 26.81 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 23.83 | 26.63 |
| Bra034120.1-P | Field mustard | cytosol, nucleus, plastid | 23.83 | 26.63 |
| Os02t0822400-01 | Rice | nucleus | 28.0 | 26.58 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 12.83 | 26.55 |
| CDY00676 | Canola | nucleus | 18.83 | 26.4 |
| CDY41352 | Canola | nucleus | 18.5 | 26.37 |
| Bra034118.1-P | Field mustard | nucleus | 18.5 | 26.37 |
| Bra001365.1-P | Field mustard | nucleus | 18.83 | 26.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.5 | 26.2 |
| VIT_13s0019g05230.t01 | Wine grape | nucleus | 18.83 | 26.16 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 27.83 | 26.05 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 17.67 | 25.98 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 27.83 | 25.97 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 27.83 | 25.93 |
| TraesCS7D01G283800.1 | Wheat | nucleus | 27.83 | 25.85 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 27.83 | 25.85 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 16.0 | 25.81 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 27.5 | 25.7 |
| Bra034119.1-P | Field mustard | nucleus | 18.67 | 25.45 |
| CDY41353 | Canola | nucleus | 18.67 | 25.4 |
| GSMUA_Achr11P... | Banana | nucleus | 16.17 | 25.33 |
| Bra001366.1-P | Field mustard | nucleus | 17.67 | 25.18 |
| EES06041 | Sorghum | nucleus | 27.33 | 25.15 |
| Bra029844.1-P | Field mustard | nucleus, plastid | 18.83 | 24.84 |
| CDY00946 | Canola | nucleus | 18.67 | 24.83 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 18.83 | 24.78 |
| CDY08601 | Canola | nucleus, plastid | 18.67 | 24.62 |
| Os08t0562200-02 | Rice | nucleus | 26.83 | 24.54 |
| OQU80699 | Sorghum | plastid | 27.33 | 24.48 |
| AT3G10490.2 | Thale cress | nucleus | 18.33 | 24.39 |
| Zm00001d051879_P001 | Maize | nucleus | 26.67 | 24.35 |
| GSMUA_Achr11P... | Banana | nucleus | 17.67 | 24.2 |
| Zm00001d049913_P001 | Maize | plastid | 25.67 | 24.14 |
| Zm00001d031898_P001 | Maize | plastid | 26.83 | 24.1 |
| KRH34660 | Soybean | plastid | 18.67 | 24.09 |
| KRG92121 | Soybean | cytosol | 24.17 | 24.01 |
| KRG92124 | Soybean | nucleus | 18.5 | 23.87 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 14.17 | 23.74 |
| CDX73920 | Canola | nucleus | 17.67 | 23.71 |
| TraesCSU01G135000.1 | Wheat | nucleus | 27.83 | 23.55 |
| CDY00677 | Canola | nucleus | 17.17 | 23.15 |
| CDY70628 | Canola | golgi | 14.83 | 22.47 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 23.0 | 21.53 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 13.33 | 21.39 |
| AT3G10480.3 | Thale cress | plastid | 18.5 | 21.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.33 | 20.39 |
| GSMUA_Achr11P... | Banana | nucleus | 13.33 | 20.2 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 19.5 | 19.93 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 18.0 | 19.42 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 18.0 | 17.79 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 15.67 | 17.64 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 14.83 | 15.48 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 14.5 | 15.16 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 15.83 | 12.52 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr9G20400_001 | EnsemblPlants:GSMUA_Achr9P20400_001 | EnsemblPlants:GSMUA_Achr9T20400_001 | InterPro:IPR003441 |
| InterPro:IPR036093 | UniProt:M0U1Z9 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF43 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI000294AD79 | SEG:seg |
Description
No apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G20400_001]
Coordinates
chr9:+:24416030..24420201
Molecular Weight (calculated)
65748.0 Da
IEP (calculated)
4.477
GRAVY (calculated)
-0.473
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRRSLNAGN AASSDQLPPA AASSLAPGFR FHPTDEELVS YYLKRKVCGR PLRNDAVAEV DLYSPLDRKY SNRSRTNRAT PQGYWKTTGK DRPVCRGPRV
101: VGMKKTLVYH AGRAPHGTRT NWVMHEYRLK DEELTQAGIS QNAFVVCRIF QKSGAGPQNG AQYGAPFLEE EWEVEADDAV VLMPDGGEDD EVNEAAEQEY
201: LHFGDFVKNV DLENQHVNAS NLVADLDEDY GGLTEDATIL LDETVDDTSF TNMVECIDEP GQQISQTPTD DMEKETLMEE HTHNHSPPNE KDEYVELNDL
301: TDSANATFPL SEESTQDNFY VQPNDLSPVP GGCPSSQQLQ ENMVFCDAPS DNLAFEHEKD QFTHSPVHDT SGFEMIDDLL AYFDATNDKL YYDTIGFPGC
401: SECTSSSDKS NFPGEVCDGN CSTSKAPAQV PDTHIVGGAS SSASSVACNA HMKDGNDKTI SKCLVNMLGS IPAPPAFAAE YPAGAAKSMA QTSAVHPASS
501: IHVTTGFVYI CDPTVSGSVG HWSLQKNGHA SFILSYRMAD NVSRKTSDFV PSKNQVDAVS VVLRGGLYVL FLLPLFLTIS YKVGITICGR SWFNNTWHYL
101: VGMKKTLVYH AGRAPHGTRT NWVMHEYRLK DEELTQAGIS QNAFVVCRIF QKSGAGPQNG AQYGAPFLEE EWEVEADDAV VLMPDGGEDD EVNEAAEQEY
201: LHFGDFVKNV DLENQHVNAS NLVADLDEDY GGLTEDATIL LDETVDDTSF TNMVECIDEP GQQISQTPTD DMEKETLMEE HTHNHSPPNE KDEYVELNDL
301: TDSANATFPL SEESTQDNFY VQPNDLSPVP GGCPSSQQLQ ENMVFCDAPS DNLAFEHEKD QFTHSPVHDT SGFEMIDDLL AYFDATNDKL YYDTIGFPGC
401: SECTSSSDKS NFPGEVCDGN CSTSKAPAQV PDTHIVGGAS SSASSVACNA HMKDGNDKTI SKCLVNMLGS IPAPPAFAAE YPAGAAKSMA QTSAVHPASS
501: IHVTTGFVYI CDPTVSGSVG HWSLQKNGHA SFILSYRMAD NVSRKTSDFV PSKNQVDAVS VVLRGGLYVL FLLPLFLTIS YKVGITICGR SWFNNTWHYL
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
Arabidopsis Description
NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.