Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 67.46 | 69.6 |
| CDY46459 | Canola | nucleus | 23.51 | 45.39 |
| GSMUA_Achr11P... | Banana | cytosol | 14.31 | 44.44 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 18.06 | 44.17 |
| GSMUA_Achr10P... | Banana | nucleus | 18.74 | 42.8 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 17.38 | 42.32 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 14.14 | 38.97 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 37.82 | 38.81 |
| KRG91745 | Soybean | nucleus | 33.9 | 36.25 |
| PGSC0003DMT400043681 | Potato | nucleus | 35.78 | 35.84 |
| Solyc04g072220.2.1 | Tomato | cytosol, nucleus, plastid | 36.46 | 35.73 |
| KRH35027 | Soybean | nucleus | 34.07 | 35.71 |
| Solyc12g056790.1.1 | Tomato | nucleus | 35.78 | 35.59 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 14.99 | 35.48 |
| Bra036744.1-P | Field mustard | nucleus | 32.54 | 34.92 |
| AT1G34190.1 | Thale cress | nucleus | 32.54 | 34.29 |
| CDX91785 | Canola | nucleus | 31.35 | 34.14 |
| CDX93723 | Canola | nucleus | 31.86 | 33.63 |
| Bra028039.1-P | Field mustard | nucleus | 31.86 | 33.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.1 | 33.24 |
| CDX73305 | Canola | nucleus | 29.47 | 33.21 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 20.95 | 33.06 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 31.18 | 32.5 |
| Bra012342.1-P | Field mustard | nucleus | 27.77 | 32.02 |
| CDY25752 | Canola | nucleus | 27.77 | 32.02 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 29.64 | 31.87 |
| Bra034439.1-P | Field mustard | nucleus | 31.35 | 31.83 |
| CDY28397 | Canola | nucleus | 31.35 | 31.83 |
| AT1G34180.2 | Thale cress | nucleus | 31.18 | 31.77 |
| Bra034436.1-P | Field mustard | cytosol, nucleus, plastid | 29.47 | 31.68 |
| CDX73304 | Canola | nucleus | 31.18 | 31.39 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 15.33 | 31.03 |
| GSMUA_Achr11P... | Banana | nucleus | 19.76 | 30.29 |
| CDY12515 | Canola | plastid | 27.6 | 29.72 |
| AT1G32870.3 | Thale cress | nucleus | 27.94 | 29.08 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 20.1 | 28.92 |
| Os09t0493700-01 | Rice | nucleus | 33.9 | 28.35 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 17.04 | 27.93 |
| KXG35937 | Sorghum | nucleus | 33.39 | 27.64 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 32.03 | 27.53 |
| GSMUA_Achr11P... | Banana | nucleus | 19.93 | 26.71 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 33.05 | 26.58 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 33.22 | 25.73 |
| PGSC0003DMT400079995 | Potato | nucleus | 37.48 | 24.42 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 15.5 | 24.33 |
| GSMUA_Achr11P... | Banana | nucleus | 15.67 | 23.23 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 20.61 | 21.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.38 | 21.34 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 21.47 | 21.25 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 20.27 | 19.6 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 19.93 | 19.5 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 19.42 | 19.42 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 20.78 | 19.03 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 17.89 | 18.29 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 17.72 | 18.09 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 15.67 | 17.26 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 18.06 | 13.97 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr8G24280_001 | EnsemblPlants:GSMUA_Achr8P24280_001 | EnsemblPlants:GSMUA_Achr8T24280_001 | InterPro:IPR003441 | InterPro:IPR036093 |
| UniProt:M0TT81 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF27 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI000295CC7B | SEG:seg | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_126.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G24280_001]
Coordinates
chr8:-:28514255..28517279
Molecular Weight (calculated)
65116.8 Da
IEP (calculated)
4.448
GRAVY (calculated)
-0.552
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVAKDCVGR SGGVEAAVDD RCSPGSAAGA WPGNSNWWPP GFRFHPTDEE IVLYYLKRKI CGRRFRLAMI GDVDVYKWEP WELPDKSELK SGDKQWYFFS
101: PRDRKYPNGS RSNRATKCGY WKTTGKDRTI SQNSKAMGNK KTLVYYHGRA PKGERTNWVM HEYTLDEQVF LSCNNDCYAL YKVFRKSGPG PKNGEQYGAP
201: FREEEWDDDV VDEIFRSQDN SELPTNPWNT EVPTIEPLHD LVSAGTSCDA GSNQLVDELE DILLELSNEQ NMVGQYSEHS AYVSEVNVET EIGKHNFCPS
301: LTKATSFENS GICYELSTSD TKFQVTQPDS ACVQPVEDPE MTSLTSNTQQ ILGQADEEFL EIKDFNDPES IMWSWNDLNN RDQIDGPNEL YDSYDYFDAP
401: VAFSDDFDSL GLAAPISYLD GFGGDEALDE SYHVSTELWG HNQGFGASNA DPNQVFMTSP ASGAAYASTS SNMEMVQRQN STSESWFSSA LSTLLDSVPS
501: RPALASENTF ISRAFERVSS FRAGQVGVHG PNATADGHHA TSGRRGGRNG GILFISFLVG LGAVFWVLTA GAVVKVFSAF LARFNSS
101: PRDRKYPNGS RSNRATKCGY WKTTGKDRTI SQNSKAMGNK KTLVYYHGRA PKGERTNWVM HEYTLDEQVF LSCNNDCYAL YKVFRKSGPG PKNGEQYGAP
201: FREEEWDDDV VDEIFRSQDN SELPTNPWNT EVPTIEPLHD LVSAGTSCDA GSNQLVDELE DILLELSNEQ NMVGQYSEHS AYVSEVNVET EIGKHNFCPS
301: LTKATSFENS GICYELSTSD TKFQVTQPDS ACVQPVEDPE MTSLTSNTQQ ILGQADEEFL EIKDFNDPES IMWSWNDLNN RDQIDGPNEL YDSYDYFDAP
401: VAFSDDFDSL GLAAPISYLD GFGGDEALDE SYHVSTELWG HNQGFGASNA DPNQVFMTSP ASGAAYASTS SNMEMVQRQN STSESWFSSA LSTLLDSVPS
501: RPALASENTF ISRAFERVSS FRAGQVGVHG PNATADGHHA TSGRRGGRNG GILFISFLVG LGAVFWVLTA GAVVKVFSAF LARFNSS
001: MVDSSRDSCF KAGKFSAPGF RFHPTDEELV VYYLKRKICC KKLRVNAIGV VDVYKVDPSE LPGLSMLKTG DRQWFFFTPR NRKYPNAARS SRGTATGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP
201: DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL
301: NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN
401: QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ
501: TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV FKATVGVMGR PLLS
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP
201: DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL
301: NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN
401: QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ
501: TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV FKATVGVMGR PLLS
Arabidopsis Description
anac016NAC domain containing protein 16 [Source:TAIR;Acc:AT1G34180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.