Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036744.1-P | Field mustard | nucleus | 95.73 | 94.33 |
| CDY46459 | Canola | nucleus | 52.32 | 92.76 |
| CDX93723 | Canola | nucleus | 80.89 | 78.42 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 81.08 | 77.62 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 72.17 | 71.25 |
| CDX73305 | Canola | nucleus | 67.9 | 70.25 |
| CDY28397 | Canola | nucleus | 70.32 | 65.57 |
| CDX73304 | Canola | nucleus | 69.57 | 64.32 |
| CDY70627 | Canola | cytosol | 15.77 | 51.52 |
| CDY41351 | Canola | plastid | 13.91 | 44.91 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 45.27 | 42.66 |
| CDY71253 | Canola | cytosol | 13.91 | 42.13 |
| CDX95832 | Canola | nucleus | 16.51 | 39.38 |
| CDX92153 | Canola | nucleus | 16.33 | 38.94 |
| CDY25752 | Canola | nucleus | 36.36 | 38.51 |
| Solyc12g056790.1.1 | Tomato | nucleus | 41.19 | 37.63 |
| PGSC0003DMT400043681 | Potato | nucleus | 40.82 | 37.54 |
| Solyc04g072220.2.1 | Tomato | cytosol, nucleus, plastid | 41.37 | 37.23 |
| CDY12515 | Canola | plastid | 37.11 | 36.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.51 | 32.69 |
| CDX77674 | Canola | nucleus | 16.7 | 31.69 |
| CDY63046 | Canola | nucleus | 16.88 | 31.38 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 34.14 | 31.35 |
| CDY10502 | Canola | nucleus | 17.81 | 31.27 |
| CDY01508 | Canola | nucleus | 16.51 | 31.12 |
| CDX90431 | Canola | nucleus | 16.33 | 30.77 |
| CDY42413 | Canola | nucleus | 17.63 | 30.74 |
| CDY59580 | Canola | nucleus | 16.7 | 30.61 |
| CDX67739 | Canola | nucleus | 17.63 | 30.55 |
| CDY44498 | Canola | nucleus | 16.51 | 30.48 |
| CDX87703 | Canola | nucleus | 16.51 | 30.27 |
| CDX78816 | Canola | nucleus | 16.33 | 30.14 |
| CDY44793 | Canola | nucleus | 19.48 | 30.0 |
| CDX81124 | Canola | nucleus | 18.92 | 29.82 |
| CDY66060 | Canola | nucleus | 15.77 | 29.72 |
| CDY67205 | Canola | nucleus | 15.77 | 29.72 |
| CDY43785 | Canola | nucleus | 18.74 | 29.36 |
| CDX84485 | Canola | nucleus | 18.55 | 28.9 |
| CDX84070 | Canola | nucleus | 15.03 | 28.62 |
| CDX86970 | Canola | nucleus | 16.33 | 27.85 |
| PGSC0003DMT400079995 | Potato | nucleus | 42.49 | 25.42 |
| Os09t0493700-01 | Rice | nucleus | 32.28 | 24.79 |
| CDY00676 | Canola | nucleus | 19.48 | 24.53 |
| CDY41352 | Canola | nucleus | 19.11 | 24.47 |
| CDX78356 | Canola | nucleus | 16.33 | 24.24 |
| CDY41353 | Canola | nucleus | 19.67 | 24.04 |
| CDX88803 | Canola | cytosol | 15.03 | 24.04 |
| CDX69911 | Canola | nucleus | 19.3 | 23.74 |
| CDY21575 | Canola | nucleus | 19.11 | 23.73 |
| CDX70995 | Canola | cytosol | 14.66 | 23.65 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 29.87 | 23.57 |
| CDY00946 | Canola | nucleus | 19.67 | 23.5 |
| KXG35937 | Sorghum | nucleus | 30.8 | 23.41 |
| CDY00677 | Canola | nucleus | 19.3 | 23.37 |
| CDY08601 | Canola | nucleus, plastid | 19.67 | 23.3 |
| CDX92368 | Canola | cytosol | 14.47 | 23.28 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 19.67 | 23.25 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 31.35 | 23.15 |
| CDX73920 | Canola | nucleus | 19.11 | 23.04 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 14.66 | 22.9 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 32.1 | 22.82 |
| CDY00208 | Canola | nucleus | 18.18 | 22.69 |
| CDY04487 | Canola | cytosol | 14.47 | 22.61 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 22.45 | 22.53 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 14.29 | 22.45 |
| CDY09128 | Canola | cytosol | 14.29 | 22.45 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 14.1 | 22.42 |
| CDY28745 | Canola | cytosol | 19.85 | 22.38 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 13.91 | 22.19 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 22.82 | 22.12 |
| CDY05939 | Canola | nucleus | 18.92 | 22.03 |
| CDY43143 | Canola | nucleus | 19.48 | 21.97 |
| CDY49932 | Canola | nucleus | 19.48 | 21.92 |
| CDY19828 | Canola | nucleus | 18.0 | 21.8 |
| CDY16943 | Canola | nucleus | 20.04 | 21.73 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 22.63 | 21.55 |
| CDX78734 | Canola | cytosol | 19.3 | 21.22 |
| CDY08139 | Canola | nucleus | 18.18 | 21.12 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 21.71 | 21.12 |
| CDX70745 | Canola | cytosol | 19.3 | 21.05 |
| CDX88115 | Canola | cytosol | 17.25 | 20.99 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 20.04 | 20.81 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 19.67 | 20.54 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 21.34 | 20.54 |
| CDX80455 | Canola | nucleus | 17.25 | 20.39 |
| CDY70628 | Canola | golgi | 14.84 | 20.2 |
| CDY60870 | Canola | nucleus | 19.85 | 18.54 |
| CDY34716 | Canola | nucleus | 9.83 | 18.03 |
| CDY16427 | Canola | nucleus | 19.67 | 17.82 |
| CDY26922 | Canola | nucleus | 20.59 | 17.45 |
| CDY21216 | Canola | nucleus | 13.91 | 17.44 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 18.74 | 17.21 |
| CDY66161 | Canola | nucleus | 20.22 | 17.17 |
| CDX87118 | Canola | nucleus | 18.18 | 11.78 |
| CDX69392 | Canola | nucleus | 8.35 | 10.51 |
| CDX86969 | Canola | cytosol | 1.48 | 7.48 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DR37 | EnsemblPlants:CDX91785 | ProteinID:CDX91785 | ProteinID:CDX91785.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00153359001 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF27 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EC0339 | : |
Description
BnaC08g07040D
Coordinates
chrLK031869:-:1351022..1353493
Molecular Weight (calculated)
60147.2 Da
IEP (calculated)
4.483
GRAVY (calculated)
-0.482
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSCLKGGK FSAPGFRFHP TDEELVMYYL KRKICKRKLR VNAIGVVDVY KLDPEELPGQ SVLKTGDRQW FYFTPRSRKY PNAARSGRCT ATGYWKATGK
101: VRVISYNSRS VGLKKTLVFY RGRTPNGQRT DWVMHEYTMD EDELGRCKNA KEYYALYKLF KKSGAGPKNG EEYGAPFQEE EWADDDIDVP VVRYEDNVSL
201: FDPVNVQLDD LEEILSGIPY APGVPQTFTS IPQVNREEEL QSTLVNNSAR DFLKPQETGD FLPNDMPSSY ESIDVTSAPN NSVLVFEKDY IEMDDLLTPE
301: HGASSAENPA QLLNPGEYGD FNDFDQLFHD VSMSLDMEPI LQGTSADPLS NFADNTSDQE HPFPYQLFQD QTIENKLNNI MDPSPNLNQF SDDLWLEDDN
401: QAFLFDQPQS VISGAFASPS SGVEPGSTNL VNAQDQEGVN GGGGTSPFSS ALWAFMDSIP STPASACEGP INRTFVRMSS FTRIKFSGIA NGTPVTTAVM
501: TKKRSRNRWF LLLSTVGALC AIFWVLMATV QASGRPVFS
101: VRVISYNSRS VGLKKTLVFY RGRTPNGQRT DWVMHEYTMD EDELGRCKNA KEYYALYKLF KKSGAGPKNG EEYGAPFQEE EWADDDIDVP VVRYEDNVSL
201: FDPVNVQLDD LEEILSGIPY APGVPQTFTS IPQVNREEEL QSTLVNNSAR DFLKPQETGD FLPNDMPSSY ESIDVTSAPN NSVLVFEKDY IEMDDLLTPE
301: HGASSAENPA QLLNPGEYGD FNDFDQLFHD VSMSLDMEPI LQGTSADPLS NFADNTSDQE HPFPYQLFQD QTIENKLNNI MDPSPNLNQF SDDLWLEDDN
401: QAFLFDQPQS VISGAFASPS SGVEPGSTNL VNAQDQEGVN GGGGTSPFSS ALWAFMDSIP STPASACEGP INRTFVRMSS FTRIKFSGIA NGTPVTTAVM
501: TKKRSRNRWF LLLSTVGALC AIFWVLMATV QASGRPVFS
001: MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD
Arabidopsis Description
NAC017NAC017 [Source:UniProtKB/TrEMBL;Acc:A0A178WNW4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.