Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66060 | Canola | nucleus | 96.47 | 95.45 |
| CDY67205 | Canola | nucleus | 96.47 | 95.45 |
| AT1G32510.1 | Thale cress | nucleus | 80.21 | 80.21 |
| CDY71253 | Canola | cytosol | 31.8 | 50.56 |
| CDX77674 | Canola | nucleus | 49.12 | 48.94 |
| CDX90431 | Canola | nucleus | 49.12 | 48.6 |
| CDY01508 | Canola | nucleus | 48.41 | 47.9 |
| CDY63046 | Canola | nucleus | 48.76 | 47.59 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 41.7 | 47.58 |
| CDY70627 | Canola | cytosol | 27.56 | 47.27 |
| CDX78816 | Canola | nucleus | 48.76 | 47.26 |
| CDY44498 | Canola | nucleus | 48.76 | 47.26 |
| CDY59580 | Canola | nucleus | 48.76 | 46.94 |
| CDY41351 | Canola | plastid | 27.56 | 46.71 |
| CDX87703 | Canola | nucleus | 48.41 | 46.6 |
| CDX92153 | Canola | nucleus | 36.04 | 45.13 |
| CDX95832 | Canola | nucleus | 36.04 | 45.13 |
| KRH04320 | Soybean | nucleus | 52.3 | 43.27 |
| KRH58218 | Soybean | nucleus | 51.94 | 42.61 |
| Solyc08g077110.2.1 | Tomato | nucleus | 49.47 | 41.18 |
| PGSC0003DMT400045129 | Potato | nucleus | 48.41 | 41.14 |
| Solyc06g061080.2.1 | Tomato | nucleus | 48.76 | 40.95 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 49.82 | 38.63 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 41.34 | 37.62 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 42.4 | 35.82 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 43.82 | 34.64 |
| CDY10502 | Canola | nucleus | 36.75 | 33.88 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 40.99 | 33.82 |
| CDX67739 | Canola | nucleus | 37.1 | 33.76 |
| EER94455 | Sorghum | nucleus | 42.05 | 33.71 |
| CDY42413 | Canola | nucleus | 36.4 | 33.33 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 41.7 | 33.05 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 42.4 | 32.88 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 42.05 | 32.43 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 42.05 | 31.82 |
| GSMUA_Achr11P... | Banana | nucleus | 43.11 | 30.81 |
| CDY46459 | Canola | nucleus | 28.62 | 26.64 |
| CDX86970 | Canola | nucleus | 28.62 | 25.63 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 29.33 | 24.48 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 28.98 | 24.26 |
| CDY43785 | Canola | nucleus | 29.33 | 24.13 |
| CDX88803 | Canola | cytosol | 28.62 | 24.04 |
| CDX70995 | Canola | cytosol | 28.27 | 23.95 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 28.98 | 23.77 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 28.62 | 23.62 |
| CDX92368 | Canola | cytosol | 27.92 | 23.58 |
| CDY04487 | Canola | cytosol | 28.62 | 23.48 |
| CDX84485 | Canola | nucleus | 28.62 | 23.41 |
| CDY09128 | Canola | cytosol | 28.27 | 23.32 |
| CDY44793 | Canola | nucleus | 28.27 | 22.86 |
| CDX81124 | Canola | nucleus | 27.56 | 22.81 |
| CDY43143 | Canola | nucleus | 37.1 | 21.97 |
| CDY28745 | Canola | cytosol | 36.4 | 21.55 |
| CDY16943 | Canola | nucleus | 37.46 | 21.33 |
| CDY49932 | Canola | nucleus | 36.04 | 21.29 |
| CDX70745 | Canola | cytosol | 37.1 | 21.26 |
| CDX78734 | Canola | cytosol | 36.75 | 21.22 |
| CDY41352 | Canola | nucleus | 30.74 | 20.67 |
| CDY00676 | Canola | nucleus | 31.1 | 20.56 |
| TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 28.98 | 20.05 |
| TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 28.98 | 20.05 |
| TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 28.98 | 20.05 |
| CDY41353 | Canola | nucleus | 30.74 | 19.73 |
| CDY00946 | Canola | nucleus | 31.1 | 19.51 |
| CDY08601 | Canola | nucleus, plastid | 31.1 | 19.34 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 31.1 | 19.3 |
| CDX73920 | Canola | nucleus | 29.68 | 18.79 |
| CDX88115 | Canola | cytosol | 29.33 | 18.74 |
| CDY60870 | Canola | nucleus | 38.16 | 18.72 |
| CDY34716 | Canola | nucleus | 19.43 | 18.71 |
| CDY00677 | Canola | nucleus | 29.33 | 18.65 |
| CDY16427 | Canola | nucleus | 38.87 | 18.49 |
| CDY19828 | Canola | nucleus | 28.98 | 18.43 |
| CDX80455 | Canola | nucleus | 29.33 | 18.2 |
| CDY05939 | Canola | nucleus | 29.68 | 18.14 |
| CDY08139 | Canola | nucleus | 29.68 | 18.1 |
| CDY00208 | Canola | nucleus | 27.56 | 18.06 |
| CDX69911 | Canola | nucleus | 27.56 | 17.81 |
| CDY21575 | Canola | nucleus | 27.21 | 17.74 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 32.16 | 17.53 |
| CDX78356 | Canola | nucleus | 22.26 | 17.36 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 31.45 | 17.25 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 33.22 | 16.91 |
| CDY25752 | Canola | nucleus | 30.04 | 16.7 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 33.22 | 16.61 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 32.51 | 16.61 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 32.16 | 16.25 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 30.39 | 16.01 |
| CDY70628 | Canola | golgi | 22.26 | 15.91 |
| CDX93723 | Canola | nucleus | 31.1 | 15.83 |
| CDY21216 | Canola | nucleus | 24.03 | 15.81 |
| CDY12515 | Canola | plastid | 30.04 | 15.6 |
| CDX73305 | Canola | nucleus | 28.62 | 15.55 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 30.04 | 15.1 |
| CDX91785 | Canola | nucleus | 28.62 | 15.03 |
| CDY28397 | Canola | nucleus | 30.39 | 14.88 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 28.62 | 14.84 |
| CDX73304 | Canola | nucleus | 30.39 | 14.75 |
| CDY66161 | Canola | nucleus | 30.74 | 13.7 |
| CDY26922 | Canola | nucleus | 30.74 | 13.68 |
| CDX87118 | Canola | nucleus | 28.98 | 9.86 |
| CDX69392 | Canola | nucleus | 13.78 | 9.11 |
| CDX86969 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078D4K8 | EnsemblPlants:CDX84070 | ProteinID:CDX84070 | ProteinID:CDX84070.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00139965001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF51 | SUPFAM:SSF101941 | UniParc:UPI0004EB8293 | SEG:seg | : | : |
Description
BnaC08g07470D
Coordinates
chrLK031835:+:643170..644289
Molecular Weight (calculated)
32731.3 Da
IEP (calculated)
5.108
GRAVY (calculated)
-0.631
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRSYLPPGF RFHPTDEELV GYYLHRRNEG LEIELEIIPL MDLYKFDPWE LPEKSFLPNR DMEWFFFCHR DRKYQNGSRI NRATKSGYWK ATGKDRKIVC
101: QSSSSSSTSS IIGCRKTLVF YLGRAPFGGR TEWAMHEYRL FDNDTSQGSL SYKGDFALCR VIKRNEVTLK KCETSSLEVP DEPLTNNVDI PCEARYIGKG
201: SCDASNTLRA SPNFILGSST KGNSQSQTEE DSGFQEFSLP EIEYPPEFFA DLNFDWGMEN PFPFVQYQEA HVNNEVINYD VLR
101: QSSSSSSTSS IIGCRKTLVF YLGRAPFGGR TEWAMHEYRL FDNDTSQGSL SYKGDFALCR VIKRNEVTLK KCETSSLEVP DEPLTNNVDI PCEARYIGKG
201: SCDASNTLRA SPNFILGSST KGNSQSQTEE DSGFQEFSLP EIEYPPEFFA DLNFDWGMEN PFPFVQYQEA HVNNEVINYD VLR
001: MVGSFLPPGF RFYPTDEELV GYYLHRRNEG LEIELEIIPL MDLYKFDPWE LPEKSFLPNR DMEWFFFCHR DRKYQNGSRI NRATKSGYWK ATGKDRKIVC
101: HSSSSSSSSS ITGCRKTLVF YMGRAPFGGR TEWVMHEYRL FDNDTSQGSL NFKGDFALCR VIKRNEHTLK KCEIISPEVS DESLSNNVNN FCQASDLEKG
201: SCDASNTRLS SPDFILESSF QGNSHSKTEE DSGFQVFTLP EFEYPLEVFA DLNFDLEMED PFMFDYHPEP HMNNEVMSHH IRG
101: HSSSSSSSSS ITGCRKTLVF YMGRAPFGGR TEWVMHEYRL FDNDTSQGSL NFKGDFALCR VIKRNEHTLK KCEIISPEVS DESLSNNVNN FCQASDLEKG
201: SCDASNTRLS SPDFILESSF QGNSHSKTEE DSGFQVFTLP EFEYPLEVFA DLNFDLEMED PFMFDYHPEP HMNNEVMSHH IRG
Arabidopsis Description
ANAC011NAC011 [Source:UniProtKB/TrEMBL;Acc:A0A178WL27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.