Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88803 | Canola | cytosol | 93.11 | 92.28 |
| Bra006619.1-P | Field mustard | cytosol | 92.81 | 91.99 |
| CDX92368 | Canola | cytosol | 79.64 | 79.4 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 81.14 | 79.01 |
| AT5G22290.1 | Thale cress | cytosol | 80.24 | 78.82 |
| CDY09128 | Canola | cytosol | 80.54 | 78.43 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 65.87 | 64.9 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 63.47 | 62.72 |
| CDY34716 | Canola | nucleus | 50.0 | 56.8 |
| CDY70627 | Canola | cytosol | 21.56 | 43.64 |
| CDY41351 | Canola | plastid | 20.96 | 41.92 |
| CDY71253 | Canola | cytosol | 21.56 | 40.45 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 39.82 | 38.55 |
| CDY04487 | Canola | cytosol | 39.52 | 38.26 |
| VIT_06s0080g00970.t01 | Wine grape | nucleus | 40.72 | 35.05 |
| KRH22653 | Soybean | nucleus | 38.92 | 35.04 |
| PGSC0003DMT400015077 | Potato | nucleus | 42.52 | 34.8 |
| Solyc06g074170.2.1 | Tomato | nucleus | 41.92 | 34.23 |
| PGSC0003DMT400050482 | Potato | nucleus | 42.81 | 33.26 |
| CDX95832 | Canola | nucleus | 22.46 | 33.19 |
| CDX92153 | Canola | nucleus | 22.46 | 33.19 |
| Solyc11g068750.1.1 | Tomato | nucleus, plasma membrane | 42.81 | 31.64 |
| CDX77674 | Canola | nucleus | 25.45 | 29.93 |
| CDX90431 | Canola | nucleus | 25.45 | 29.72 |
| CDY01508 | Canola | nucleus | 25.15 | 29.37 |
| CDY63046 | Canola | nucleus | 25.45 | 29.31 |
| CDY59580 | Canola | nucleus | 25.15 | 28.57 |
| CDY66060 | Canola | nucleus | 24.25 | 28.32 |
| CDY67205 | Canola | nucleus | 24.25 | 28.32 |
| CDX84070 | Canola | nucleus | 23.95 | 28.27 |
| CDX87703 | Canola | nucleus | 24.85 | 28.23 |
| CDX78816 | Canola | nucleus | 24.25 | 27.74 |
| CDY44498 | Canola | nucleus | 24.25 | 27.74 |
| CDX86970 | Canola | nucleus | 25.15 | 26.58 |
| KRH26664 | Soybean | nucleus | 38.92 | 26.37 |
| CDY10502 | Canola | nucleus | 23.65 | 25.73 |
| CDY42413 | Canola | nucleus | 23.65 | 25.57 |
| CDX67739 | Canola | nucleus | 23.65 | 25.4 |
| CDX81124 | Canola | nucleus | 25.45 | 24.85 |
| CDY43785 | Canola | nucleus | 25.15 | 24.42 |
| CDY44793 | Canola | nucleus | 25.45 | 24.29 |
| CDX84485 | Canola | nucleus | 25.15 | 24.28 |
| CDY46459 | Canola | nucleus | 21.86 | 24.01 |
| CDY19828 | Canola | nucleus | 27.25 | 20.45 |
| CDX88115 | Canola | cytosol | 26.95 | 20.32 |
| CDY41352 | Canola | nucleus | 25.15 | 19.95 |
| CDY05939 | Canola | nucleus | 27.54 | 19.87 |
| CDY00676 | Canola | nucleus | 25.45 | 19.86 |
| CDX80455 | Canola | nucleus | 26.95 | 19.74 |
| CDY00208 | Canola | nucleus | 25.45 | 19.68 |
| CDX69911 | Canola | nucleus | 25.45 | 19.41 |
| CDY08139 | Canola | nucleus | 26.65 | 19.18 |
| CDY41353 | Canola | nucleus | 25.15 | 19.05 |
| CDY21575 | Canola | nucleus | 24.55 | 18.89 |
| CDY28745 | Canola | cytosol | 26.65 | 18.62 |
| CDY43143 | Canola | nucleus | 26.65 | 18.62 |
| CDY49932 | Canola | nucleus | 26.65 | 18.58 |
| CDX78356 | Canola | nucleus | 20.06 | 18.46 |
| CDY00946 | Canola | nucleus | 24.85 | 18.4 |
| CDY16943 | Canola | nucleus | 27.25 | 18.31 |
| CDX70745 | Canola | cytosol | 26.95 | 18.22 |
| CDX78734 | Canola | cytosol | 26.65 | 18.16 |
| CDX73920 | Canola | nucleus | 24.25 | 18.12 |
| CDY08601 | Canola | nucleus, plastid | 24.55 | 18.02 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 24.55 | 17.98 |
| CDY00677 | Canola | nucleus | 23.65 | 17.75 |
| CDY25752 | Canola | nucleus | 25.75 | 16.9 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 25.15 | 16.28 |
| CDY12515 | Canola | plastid | 25.75 | 15.78 |
| CDX73305 | Canola | nucleus | 24.55 | 15.74 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 26.05 | 15.7 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 24.25 | 15.61 |
| CDY26922 | Canola | nucleus | 29.64 | 15.57 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 26.35 | 15.55 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 25.75 | 15.47 |
| CDY66161 | Canola | nucleus | 29.34 | 15.43 |
| CDY60870 | Canola | nucleus | 26.65 | 15.42 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 24.55 | 15.27 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 24.85 | 15.2 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 25.45 | 15.18 |
| CDX93723 | Canola | nucleus | 25.15 | 15.11 |
| CDY16427 | Canola | nucleus | 26.65 | 14.96 |
| CDX91785 | Canola | nucleus | 23.65 | 14.66 |
| CDY28397 | Canola | nucleus | 25.15 | 14.53 |
| CDX73304 | Canola | nucleus | 25.15 | 14.41 |
| CDY70628 | Canola | golgi | 17.07 | 14.39 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 24.25 | 14.39 |
| CDY21216 | Canola | nucleus | 17.07 | 13.26 |
| CDX87118 | Canola | nucleus | 26.65 | 10.7 |
| CDX69392 | Canola | nucleus | 8.08 | 6.31 |
| CDX86969 | Canola | cytosol | 0.9 | 2.8 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078C2B4 | EnsemblPlants:CDX70995 | ProteinID:CDX70995 | ProteinID:CDX70995.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00140926001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF40 | SUPFAM:SSF101941 | UniParc:UPI0004EB4CCD | SEG:seg | : | : |
Description
BnaC03g10790D
Coordinates
chrLK031791:-:3095496..3097991
Molecular Weight (calculated)
37676.8 Da
IEP (calculated)
4.613
GRAVY (calculated)
-0.356
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVDPVGVSM DTVEALTVFP GFKFSPTDVE LISYYLKRKM DGLERSVEVI PETDIYNFEP WDLPDKSIVK SDTEWFFFCP RGKKYPHGSQ NRRTTKMGYW
101: KATGKERDVK SSSEVIGTKR TLVFHIGRAP KGERTEWIMH EYSMKGSPLD DALVVCRLRR NIEFHKAPEP NLAADKHMIL PNGPASSGSP SDWDSMIDFY
201: LAGESGENLL TEMAETSRNV QVHTDEDFFA DILSDDIISL DEAVMTGNTT NEVPTLESAS METRLLPLPN MIDKHMASLL EEIPPQEKEG KESSSTEPLS
301: SCFVGLYSIK TVNRVRWDVI IGAVALIAML FYLE
101: KATGKERDVK SSSEVIGTKR TLVFHIGRAP KGERTEWIMH EYSMKGSPLD DALVVCRLRR NIEFHKAPEP NLAADKHMIL PNGPASSGSP SDWDSMIDFY
201: LAGESGENLL TEMAETSRNV QVHTDEDFFA DILSDDIISL DEAVMTGNTT NEVPTLESAS METRLLPLPN MIDKHMASLL EEIPPQEKEG KESSSTEPLS
301: SCFVGLYSIK TVNRVRWDVI IGAVALIAML FYLE
001: MDTKAVGVSK DTAASMEAST VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPDLEIYN FEPWDLPDKS IVKSDSEWFF FCARGKKYPH GSQNRRATKM
101: GYWKATGKER DVKSGSEVIG TKRTLVFHIG RAPKGERTDW IMHEYCVKGV SLDDAMVVCR VRRNKEYNSG TSQKAPKPNS SAEKHAKVQN GATSSGSPSD
201: WDNLVDFYLA GESGEKLLAE MAESSENLQV DNDEDFFADI LRDEIINLDE AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE RPSQKKKGKD
301: ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE
101: GYWKATGKER DVKSGSEVIG TKRTLVFHIG RAPKGERTDW IMHEYCVKGV SLDDAMVVCR VRRNKEYNSG TSQKAPKPNS SAEKHAKVQN GATSSGSPSD
201: WDNLVDFYLA GESGEKLLAE MAESSENLQV DNDEDFFADI LRDEIINLDE AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE RPSQKKKGKD
301: ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE
Arabidopsis Description
NAC089NAC domain-containing protein 89 [Source:UniProtKB/Swiss-Prot;Acc:Q94F58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.