CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001369.1-P	Field mustard	plasma membrane	94.24	94.24
CDY00682	Canola	cytosol	32.42	89.92
CDY00683	Canola	cytosol	40.0	84.08
CDY08590	Canola	cytosol	78.79	80.25
CDY00956	Canola	cytosol	76.06	77.23
AT3G10572.1	Thale cress	cytosol	77.58	76.88
Solyc07g017290.2.1	Tomato	cytosol	41.21	38.75
Solyc12g017470.1.1	Tomato	cytosol	41.52	38.27
KRH74139	Soybean	cytosol	39.39	37.46
VIT_07s0130g00080.t01	Wine grape	cytosol	42.73	36.25
KRH49075	Soybean	cytosol	38.79	35.07
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	39.09	35.05
PGSC0003DMT400016535	Potato	cytosol	32.73	34.18
PGSC0003DMT400024738	Potato	mitochondrion	15.76	30.23
Os06t0702800-01	Rice	cytosol	32.42	29.32
TraesCS7B01G316200.1	Wheat	cytosol	30.0	27.42
Zm00001d014696_P002	Maize	cytosol	29.7	27.37
EER88914	Sorghum	cytosol	29.39	26.94
TraesCS7A01G416200.1	Wheat	cytosol	29.39	26.87
TraesCS7D01G409500.1	Wheat	cytosol	29.39	26.87
HORVU7Hr1G096480.4	Barley	plastid	30.0	20.5

Protein Annotations

EnsemblPlants:CDX73917	EnsemblPlantsGene:GSBRNA2T00111643001	GO:GO:0006810	GO:GO:0008150	GO:GO:0015919	InterPro:APEM9
PANTHER:PTHR36361	ProteinID:CDX73917	ProteinID:CDX73917.1	SEG:seg	UniParc:UPI0004EDE047	MapMan:23.4.1.5.2

Description

BnaA03g31300D

Coordinates

chrLK031800:-:530941..533020

Molecular Weight (calculated)

36847.2 Da

IEP (calculated)

4.825

GRAVY (calculated)

-0.007

Length

330 amino acids

Sequence
(BLAST)

001: MEATGGIWGE VERSESYIVC SMYEEAESLS SSILKQILGN IDDLSEEALG DHQLFHDMLE SAGMVLVQSL HGLARTDEIV TELRQVFGEV AAIPLQVLLT
101: GICLQISNGS YSGIREILEE FFSIWVYKDD HYILDDANLN VKGLHGNISL GIDEYMEAVE LYTFGVLGKD ANDVDVAISW LEKAALPEER RQGLLRRLHS
201: LLSLKSANVP VAASFEETSS YDVMNNNKSL ANDEVDYVLK LSKQHEPWSS RPLSLRLGNT WFSVSRGRVA LSLVGLIICY ALKRKRAALV RIIRRQMEST
301: KKAIVDFWKL AFSYQVNPLA AIQSIPSTTT

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.