Factsheet for PGSC0003DMT400016535

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
golgi 2
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024738	Potato	mitochondrion	50.0	91.86
Solyc12g017470.1.1	Tomato	cytosol	90.19	79.61
CDY00682	Canola	cytosol	17.41	46.22
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	42.09	36.14
VIT_07s0130g00080.t01	Wine grape	cytosol	44.3	35.99
KRH74139	Soybean	cytosol	37.97	34.58
Bra029853.1-P	Field mustard	cytosol	35.44	34.46
CDY00956	Canola	cytosol	35.44	34.46
CDY08590	Canola	cytosol	34.49	33.64
Bra001369.1-P	Field mustard	plasma membrane	34.81	33.33
KRH49075	Soybean	cytosol	37.97	32.88
CDX73917	Canola	plasma membrane	34.18	32.73
AT3G10572.1	Thale cress	cytosol	34.18	32.43
Zm00001d014696_P002	Maize	cytosol	33.23	29.33
EER88914	Sorghum	cytosol	31.01	27.22
Os06t0702800-01	Rice	cytosol	31.33	27.12
TraesCS7A01G416200.1	Wheat	cytosol	30.7	26.87
TraesCS7B01G316200.1	Wheat	cytosol	30.7	26.87
TraesCS7D01G409500.1	Wheat	cytosol	30.7	26.87
CDY00683	Canola	cytosol	12.03	24.2
HORVU7Hr1G096480.4	Barley	plastid	30.7	20.08

Protein Annotations

EnsemblPlants:PGSC0003DMT400016535	EnsemblPlantsGene:PGSC0003DMG400006457	EntrezGene:102584712	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006810	GO:GO:0008150	GO:GO:0015919	GO:GO:0016020	GO:GO:0016021	InterPro:APEM9
PANTHER:PTHR36361	PGSC:PGSC0003DMG400006457	RefSeq:XP_006344941.1	TMHMM:TMhelix	UniParc:UPI0002969DD9	UniProt:M1A7T7
MapMan:23.4.1.5.2	:	:	:	:	:

Description

3-phosphoinositide-dependent protein kinase-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400006457]

Coordinates

chr12:+:11242526..11250016

Molecular Weight (calculated)

35875.2 Da

IEP (calculated)

4.876

GRAVY (calculated)

-0.053

Length

316 amino acids

Sequence
(BLAST)

001: MAMEVAPSFP TWEEIELSEN YLVCCMFQEA AALSSSIIKQ LVDKNANTNE HNCELGDMLE SAAMILVQSY KALGRTSEIL KQLKVLFGSV TAIPAQVFLT
101: GVCLQIPDGP SAEVKEILEE FLMKWRYVDG KYYTIANMEA DVSYMEEFSN QISLRVDKYL EIIELYVITF LGRILGNFDL AISWVEKSPL SDEKRQDLLR
201: QLHSMNTLKL GSSSQSSALP LQIDECTTDS TSLIEEKSCN GTANILEHRD QSKGENTTKQ SILEFSRRRT PFWWFRTITL KFGSSCLVLS NGSIFLGFLV
301: SLVYYIVRRK QASLWR

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.