CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73917	Canola	plasma membrane	89.92	32.42
CDY08590	Canola	cytosol	75.63	27.78
CDY00956	Canola	cytosol	73.95	27.08
AT3G10572.1	Thale cress	cytosol	75.63	27.03
PGSC0003DMT400016535	Potato	cytosol	46.22	17.41
Solyc07g017290.2.1	Tomato	cytosol	46.22	15.67
VIT_07s0130g00080.t01	Wine grape	cytosol	49.58	15.17
KRH74139	Soybean	cytosol	43.7	14.99
Solyc12g017470.1.1	Tomato	cytosol	44.54	14.8
KRH49075	Soybean	cytosol	41.18	13.42
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	41.18	13.32
Zm00001d014696_P002	Maize	cytosol	31.09	10.34
Os06t0702800-01	Rice	cytosol	31.09	10.14
EER88914	Sorghum	cytosol	29.41	9.72
TraesCS7A01G416200.1	Wheat	cytosol	28.57	9.42
TraesCS7B01G316200.1	Wheat	cytosol	28.57	9.42
TraesCS7D01G409500.1	Wheat	cytosol	28.57	9.42
HORVU7Hr1G096480.4	Barley	plastid	28.57	7.04
PGSC0003DMT400024738	Potato	mitochondrion	0.84	0.58
CDY00683	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY00682	EnsemblPlantsGene:GSBRNA2T00110518001	GO:GO:0006810	GO:GO:0008150	GO:GO:0015919	InterPro:APEM9
PANTHER:PTHR36361	ProteinID:CDY00682	ProteinID:CDY00682.1	UniParc:UPI0004EF1EBF	MapMan:23.4.1.5.2	:

Description

BnaC03g36660D

Coordinates

chrLK031921:+:235381..236582

Molecular Weight (calculated)

12804.3 Da

IEP (calculated)

3.856

GRAVY (calculated)

0.173

Length

119 amino acids

Sequence
(BLAST)

001: MEATGGIWGE VERSESYLVC SMYEEAESLS SSILKQTLGN IDVLSEEALG DHQLFHDMLE SAGMVLVQSL PGVDSPGEIV NELRQVFGEV AAIPLQVLLT
101: GICLQISNGS HSGVREILE

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.